Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1268 ATGGATGATAGGGAGTCGAGGATTAGGATACAGGAGAATATGGAGGCGAGGGAATCAGGAAATGATGAGAAAGGGACGCTCAGAGAGCCACTCATTGTGAGTAGATACAGAGCAAACAACAGTTCCCAGATCGCCATTGTAGGAGCCAATGTCTGTTCGATTGAAAGTCTCGATTACGAGATTATTGAGAGTGATCTTTATATGCAAGATTTGAGGTCTAGAACAAAGGTTGAGAAGTGCCGTTATCTTGCCCTAAAATGGACACTTGCACTTCTTGTTGGTTTAGGCACAGGCCTTGTTGCTTTTTTTAATAACATTGGAGTTGAGAATATTTCTGGCACCAAGCTTCTACTTACAGAGAAGCTCATGCTCAAAAACAAGTTTCTTGAGGCCTTTGCAGTGTATGCTGGTTGTAATTTGATTTTGGCAATTGCTGCAGCAGCCCTATGTGCTTATATTGCTCCTGCGGCAGCAGGCTCAGGCATACCTGAGGTGAAGGCATACCTCAATGGGGTTGATGCTCATTCTATACTCGCTCCAAGTACCCTCTTTGTAAAGGTAACCAAGTGGAGAAGTGCTCTTCTGTGGCGGACTTTTTTTACAACAGCTGTAGTGGCTGTGGTATTGAGAGGCTTCATACAATTATGCCGAGGGGGAAGATGTGGTCTTTTCGGGGAAGGAGGCTTGATAATGTTTGATGTTAGTTCAGAAATCCCTTCATATGAAATGCCTGACGTCCTGGCAGTAATGCTCATTGGAGTTATCGGAGGACTTTTGGGAAGCCTTTACAATTATCTAGTTTACAAAGTCCTTCGCACTTACAGTGTCATAAATGAGAGAGGCCCCAAAGTGAAAGTTCTACTTGTGATCGTTATCAACCTCTTGACATCTTGTGCTTCATACGGCCTTCCATGGCTATCTCGATGTGTCCCTTGCCCTCCTAACTTGGGGGATAAGTGTCCCACCGGAGGTCGCTCTGGGAATTACAAGAGTTTCCAATGTCCACCAAACCATTACAATGATCTTGCCTCTCTGTTTTTCTCTCCTAATGATGATACTATCCGCAACCTATTAACATCAGGTGCTATCAAGGAATTTCAGATCTCTACTCTTATAACTTTCTTTGTAGTGATATACTTCCTTGGAATTATCACCTATGGCATTGCCATTCCCTCAGGCCTCTTCATTCCTGTTATTCTTGCTGGAGCCTCATATGGGCGTCTTGCTTCTCGCCTTTTAAGTTCGTTCACTGTTCTCGATGTGGGTATGTTCGCCCTCCTTGGCGCTGCATCGTTCCTTGGTGGTACCATGAGAATGACTGTTTCTATTTGTGTCATACTTCTTGAGCTCACTAATAACCTCTTGATACTCCCTTTGGTGATGCTAGTTCTCCTTATATCAAAGACTGTGGCTGATAATTTTAACCATGGTATTTATGATCAGATTGTGAAAATGAAGGGCCTGCCTTATTTAGAAGCAGTTGCAGAACCATACATGAGGCATTTAACAGCAGGAGATGTTGTTTCTGGGGCTTTATTAACATTTTCTGGGGTTGAAAAAGTGAGGAATATTGTTCATGCTTTGAGGGTAACACAACATAATGGTTTTCCTGTGATTGATGAGCCTCCATTCTCAGAAGCTCCTCAGTTGTGTGGACTGGTGTTTAGGTCTCATTTGCTTGTGCTTCTTAAACAGAGGAAGTTCACAAAGCAAAAGGTTATGACTGGATCTACTATTATGAAGAACTTCGAAGCACATGATTTTGCAAAGCCAGGTTTAGGCAAGGGAATCAAGCTAGGTGATATTCATATTGGGGAAGAGGAGATGGAAATGTATGTTGATCTTCATCCAGTCACAAACACATCTCCATACACAGTGGTGGAAACCATGTCTCTTGCAAAAGCTGCTCTTCTTTTCAGAGAGCTTGGCCTCAGGCACTTGTTGGTGGTGCCAAAGACACCAGGAAGACCTCCTATTGTTGGGATATTGACAAGGCATGATTTTATGCCAGAGCATGTTTTGGGACTCTACCCTCACTTAGATCCTCACAATGGTTCAACCACATTATGA 2070 0.4319 MDDRESRIRIQENMEARESGNDEKGTLREPLIVSRYRANNSSQIAIVGANVCSIESLDYEIIESDLYMQDLRSRTKVEKCRYLALKWTLALLVGLGTGLVAFFNNIGVENISGTKLLLTEKLMLKNKFLEAFAVYAGCNLILAIAAAALCAYIAPAAAGSGIPEVKAYLNGVDAHSILAPSTLFVKVTKWRSALLWRTFFTTAVVAVVLRGFIQLCRGGRCGLFGEGGLIMFDVSSEIPSYEMPDVLAVMLIGVIGGLLGSLYNYLVYKVLRTYSVINERGPKVKVLLVIVINLLTSCASYGLPWLSRCVPCPPNLGDKCPTGGRSGNYKSFQCPPNHYNDLASLFFSPNDDTIRNLLTSGAIKEFQISTLITFFVVIYFLGIITYGIAIPSGLFIPVILAGASYGRLASRLLSSFTVLDVGMFALLGAASFLGGTMRMTVSICVILLELTNNLLILPLVMLVLLISKTVADNFNHGIYDQIVKMKGLPYLEAVAEPYMRHLTAGDVVSGALLTFSGVEKVRNIVHALRVTQHNGFPVIDEPPFSEAPQLCGLVFRSHLLVLLKQRKFTKQKVMTGSTIMKNFEAHDFAKPGLGKGIKLGDIHIGEEEMEMYVDLHPVTNTSPYTVVETMSLAKAALLFRELGLRHLLVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHLDPHNGSTTL 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1268 689 Gene3D Clc chloride channel 78 188 - -
Lele35g1268 689 ProSiteProfiles CBS domain profile. 619 682 IPR000644 -
Lele35g1268 689 SUPERFAMILY CBS-domain pair 496 669 IPR046342 -
Lele35g1268 689 CDD CBS_pair_voltage-gated_CLC_euk_bac 503 671 - -
Lele35g1268 689 SUPERFAMILY Clc chloride channel 65 493 IPR014743 -
Lele35g1268 689 Pfam CBS domain 620 668 IPR000644 -
Lele35g1268 689 PRINTS Chloride channel signature 422 438 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele35g1268 689 PRINTS Chloride channel signature 440 459 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele35g1268 689 PRINTS Chloride channel signature 478 492 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele35g1268 689 PRINTS Chloride channel signature 155 172 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele35g1268 689 Gene3D Clc chloride channel 189 491 - -
Lele35g1268 689 MobiDBLite consensus disorder prediction 1 23 - -
Lele35g1268 689 Gene3D - 492 674 IPR046342 -
Lele35g1268 689 Pfam Voltage gated chloride channel 188 472 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele35g1268 689 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 190 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1268 Lele-ChrLele35 18766570 18772260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1268 190 682 Ion Channels AT5G49890 73.077 0.0 734