Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1263 ATGTCTGAGGATGCTAGCCCAATGCTGGTAGTTTATGATGATCCCTCAGACCAACGATCCCTATCTTTGGATGATACAAGCAGCACAGAAGAATCACCAGATGAAACCAGGCTCTCGTTGGAGACTACTAATGATTTGATTCCATATATTGGGCAAAGATTTAGCACTCATGATGCTGCATATGAATTTTATAGTGAATTTGCCAAGCGGTGTGGGTTCTCAATTCGACGACACCGTACAGAGGGAAAAGATGGTGTTGGAAAAGGACTAACTAGACGCTATTTTGTTTGCCATCGTGCTGGTAACACTCCTGTCAAAACATCAATTGAAAGTAAACCCCAAAGAAATCGAAAATCTTCCCGATGTGGATGCCAGGCTTATATGCGTATAAGCAAAACAACAGAATTAGGTACTCCAGAATGGCGTGTTACTGGTTTTGCCAACCACCATAATCATGAACTTTTAGAACCAAATCAAGTTCGATTTCTTCCTGCATACAGAACTATTTCAGATTCAGACAAAAGCCGAATCTTGATGTATGCTAAAACTGGGATTTCTATCCATCAAATGATGCGGCTTATGGAGCTTGAGAAGTGTGTAGAACCTGGATATCTGCCTTTTACTGAAAAGGATGTGAGGAATTTGCTTCAATCATTTAGGAAATTAGAACCAGAAGAGGAAAGCATAGATTTACTAAGAATGTGCAGAAATATTAAGGAGAAAGACCCTAATTTCAAATTTGAGTACGCACTTGATTCGAACAACTGTCTGGAGAATATAGCCTGGTCATATGCTTCATCAATACAGTCATATGATATCTTTGGTGATGCAGTGGTATTTGATACAACACATCGCTTGACTGCATTTGACATGCCATTGGGTATATGGGTTGGAATGAATAATTATGGAATGCCTTGCTTTTTTGGCTGTGTGCTTCTACGAGAAGAAAACTTACGGTCATATTCCTGGGCATTGAAGGCTTTCTTAGGGTTTATGAATGGGAAAGCTCCGCAGACAATATTAACAGACCAAAATATGTGTCTTAAAGAAGCATTAGCCATTGAAATGCCAGCAAGTAAACATGCTCTCTGCATATGGATGATTGTAGCAAAATTTCCTTCTTGGTTTAGTGCTGTTCTAGGAGAACGTTACAATGAATGGAAGGCTGAATTTTATAGACTGTACAATCTTGAGTCAGTTGAGGATTTTGAACTAGGTTGGAGGGATATGGTCAGTTCTTTCGGGTTGCATGCCAGCAGGCATATTGTTAATTTATATACTTTACGTTCGCTTTGGGCATTGCCATTTCTGAGAAGCCATTTTTTTGCGGGAATGACTACCACTGGTCAGTCAAAGTCAATTAATGCATTCATTCAGCGATTTCTGAGTGCACAGACCCGGCTCGCACACTTTGTAGAGCAGGTGGCTGTTGCTGTGGATTTCAGAGATCAAACTGGAGAGCAACAAACTATGCAACAGAATCTTCAAAATATTTGCCTTAAAACTGGGGCTCCCATGGAGTCACATGCTGCCACAATCCTCACTCCTTTTGCCTTTTCAAAGCTTCAGGAACAACTTGTGTTGGCTGCTCATTATGCATCTTTTCCATTTGAAGATGGTTTCCTTGTGAGGCACCATACAAAAGCTGAGGGAGGTCGGAGAGTGTATTGGGCTCCTCGGGAAGGAATTATAAGTTGCAGCTGCCACCAGTTTGAGTTCTCTGGAATTCTTTGTCGGCATGCTCTTAGAGTTCTGTCAACAGGAAATTGCTTTCAGATCCCAGATAGATATCTTCCCTCTCGTTGGTGTCGAATCAGCATGACCTCTTCTAAGCTTCTTCAGAGTGCACCTAAGGATCATGCTGAAAGAGTGCAGTTATTACAAAACATGGTTTCTGCTCTTATCACAGAATCTGCTAAGTCAAAGGAAAGATTGGATATTGCAACAGAGCAAGTTTCCGTCCTTCTATCTCGAGTAAGGGAGCAACCAGTTTCATTAAAAGGTTTTAGAGATATTTCTGGCAATGGTAGGAATGTTTGA 2040 0.4098 MSEDASPMLVVYDDPSDQRSLSLDDTSSTEESPDETRLSLETTNDLIPYIGQRFSTHDAAYEFYSEFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTSIESKPQRNRKSSRCGCQAYMRISKTTELGTPEWRVTGFANHHNHELLEPNQVRFLPAYRTISDSDKSRILMYAKTGISIHQMMRLMELEKCVEPGYLPFTEKDVRNLLQSFRKLEPEEESIDLLRMCRNIKEKDPNFKFEYALDSNNCLENIAWSYASSIQSYDIFGDAVVFDTTHRLTAFDMPLGIWVGMNNYGMPCFFGCVLLREENLRSYSWALKAFLGFMNGKAPQTILTDQNMCLKEALAIEMPASKHALCIWMIVAKFPSWFSAVLGERYNEWKAEFYRLYNLESVEDFELGWRDMVSSFGLHASRHIVNLYTLRSLWALPFLRSHFFAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFRDQTGEQQTMQQNLQNICLKTGAPMESHAATILTPFAFSKLQEQLVLAAHYASFPFEDGFLVRHHTKAEGGRRVYWAPREGIISCSCHQFEFSGILCRHALRVLSTGNCFQIPDRYLPSRWCRISMTSSKLLQSAPKDHAERVQLLQNMVSALITESAKSKERLDIATEQVSVLLSRVREQPVSLKGFRDISGNGRNV 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1263 679 SMART 26again6 564 591 IPR006564 GO:0008270
Lele35g1263 679 ProSiteProfiles Zinc finger SWIM-type profile. 553 589 IPR007527 GO:0008270
Lele35g1263 679 Pfam MULE transposase domain 278 370 IPR018289 -
Lele35g1263 679 Pfam SWIM zinc finger 555 587 IPR007527 GO:0008270
Lele35g1263 679 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 42 659 IPR031052 GO:0006355
Lele35g1263 679 MobiDBLite consensus disorder prediction 1 38 - -
Lele35g1263 679 Pfam FAR1 DNA-binding domain 62 155 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1263 Lele-ChrLele35 18730206 18733283 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele35g1263 MULE 4.2e-18 CL0219