Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1256 ATGTGGTCTATACACAGTGAATATTTCCGCTGCATTCATGGACATGATCAGGATTGTAAAGCAACCAAAGAAGTGCAGGGAATTGAAGAGAAGAGTTTCCTTTACAAAATCACTTATATTGGACGTCACACTTGCACACAAGCCTGCATTGTAGCAGATTCCTCCATGAATCATCAGGGTGGCCAGATGATTCAATTTGGGGTAGATGATTCTAACAACAATCCGGGTAAATCTACAGCGTTATGGCCTTCTAGTTCGAGGATCATCGCGGATCAAAAGCAAATTGGAAGCAGCAGGAGGAGCGACACTTGCACTCAAGCCTGTGTGACAAATTCTACTCTAACTGACAGTATAAATCAGACGGGCGAGTCGGCATCCCATGCAGATCTTGAGCTATTGTTTTCTGACTTTTGGACTGAACCTTTCGTGAATAAAACACATGACTACAGTGTCGACACAGATCCTGACTCAGAAGACATAAATTTCAAGAGAGGTGAAGTTTTGGTCTTGGCTTTTGGTTTTGATCCAGGCATCTGGTGGAAGGTTGGAAATCATAATTTGGCGAAAAGGGAGATTTCCAGCACGCTCAAGAACCTGAAGTTCATGCAAGGAGCAGCTCTAAGAGAGGAGAAATCTAAGAAAGAGGAGGATGAAGTAAAGTGTGATGTCAATATTTTTGGAACTCCCACAATAAGTAGAAAATGAGACTCAATGAAGAAGATGCAAAGCTCCATCGGCCTGCAGCTGAAACATCTAGTTCTAGGAATCAAAGTGGAAATGTTTCTATCAGGTGGTTTCTCTTTTCCTATAATACTTAGTGGACGTGTGATTTTTTCATGGCGTTTAACTATTTTGCATGAAAGCACCTGAGAAAATGGACTTGCAGTAGATGGTTCAAATTGTGCAAACACTACCAATGAGATTAGTGGGGACCTCAAAAGGAAACAGCCTGAAGCACAAAATCGAACTAAATCGGCGAAGAATGATAAAGGAGATGATCAATCATTTCCAAGAAACAGTTTGGGGTCTTTCAAAAAGCCGAAGGGAGATAAGCTAGACCGGAATGTTCTTAAGACCACCCAAATGCTAAAAGCATAA 1098 0.4153 MWSIHSEYFRCIHGHDQDCKATKEVQGIEEKSFLYKITYIGRHTCTQACIVADSSMNHQGGQMIQFGVDDSNNNPGKSTALWPSSSRIIADQKQIGSSRRSDTCTQACVTNSTLTDSINQTGESASHADLELLFSDFWTEPFVNKTHDYSVDTDPDSEDINFKRGEVLVLAFGFDPGIWWKVGNHNLAKREISSTLKNLKFMQGAALREEKSKKEEDEVKCDVNIFGTPTISRKXDSMKKMQSSIGLQLKHLVLGIKVEMFLSGGFSFPIILSGRVIFSWRLTILHESTXENGLAVDGSNCANTTNEISGDLKRKQPEAQNRTKSAKNDKGDDQSFPRNSLGSFKKPKGDKLDRNVLKTTQMLKA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1256 365 Gene3D WRKY domain 3 48 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele35g1256 365 Pfam WRKY DNA -binding domain 6 45 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele35g1256 365 SMART WRKY_cls 8 47 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele35g1256 365 MobiDBLite consensus disorder prediction 311 334 - -
Lele35g1256 365 MobiDBLite consensus disorder prediction 305 365 - -
Lele35g1256 365 SUPERFAMILY WRKY DNA-binding domain 6 46 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1256 Lele-ChrLele35 18689008 18692263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1256 8 66 WRKY Transcription Factor Family AT1G66600 45.763 3.02e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele35g1256 WRKY 8.7e-08 CL0274