Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1253 ATGGGAAGGAAAAAGGCAGACGAAGCTGGCCCTGCCACAAAGTCTAAGAAGGAAAAGTTCTCTGTCTCTGCCATGCTTGCCAGTATGGATGAAAAACCCGATAAACCGAAAAAAGTATCTTCTTCATCCAGTAAGCCCAAGGCAAAACCTGCTCCTAAAGTTTCTGCATACGCTGATATCGATCTTCCTCCCTCTGATGATGAAGATGGAGATGTCATGGAAGAGGAGAAAGAACAAAATAGTGGGCCTAAGCGGTCCACTCAGCAGCAAAGGCCTGACTTAAAGCCTCTTGGGGTGTCTATCACTGACAAAGAGTTAAAAAAGCGTGAAAAGAAGGATCTTCTTGCTGCCCATGCTGTAGAGTTGGCTAAGCAGGAAGCACTTAAGGATGACCGTGATGCTTTTACTGTGGTCATTGGAAGCCGGACTTCAGTGCTTGACGGAGAAAATGATGCTGATGCCAATGTGAAAGATGTTACAATAGAAAACTTTTCTGTATCAGCTCGGGGTAAAGAACTCCTTAAGAATGCATCAGTGAAGATATCTCATGGGAAGAGATATGGTTTGGTTGGGCCCAATGGAAAGGGTAAGTCCACACTGTTGAAGCTCCTTGCCTGGAGGAAGATACCAGTGCCAAAGAATATTGATGTGCTTCTGGTTGAACAGGAGGTAGTCGGTGATGATAAAACAGCACTTGAAGCCGTTGTTTCAGCTAATGAAGAACTTATTAAAACCCGACAAGAAGTGGCTCTTCTAAATGCAAGTTCTGTTGAAGAAAGTGCAGATAAGGATGATAGTTATGAAGATGATGCAGGTGAGAAGCTTGCTGAGCTGTATGACAAGTTACAGCTGATGGGATCTGATGCGGCTGAAGCTCAAGCATCAAAGATTCTAGCAGGATTAGGTTTTACCAAGAATATGCAGGGCGGGGCTACAAAATCATTTAGTGGGGGTTGGAGGATGAGAATTTCTTTAGCCAGAGCACTTTTTGTTCAGCCAACTCTGTTATTGCTTGATGAACCGACAAATCATCTTGATCTGAGAGCTGTTCTCTGGTTGGAGGAGTACTTATGCCGTTGGAAGAAGACTTTGGTGGTCGTATCACATGATAGGGATTTCCTAAATACAGTTTGCAATGAGATTATTCATCTGCATGATTTGAAACTTCATATCTACCGTGGAAATTTTGATGATTTTGAAAGTGGTTATGAGCAGCGTCGCAAAGAGATGAATAAGAAGTTTGAGATTTATGATAAGCAGTTGAAAGCAGCCAAAAGAAGTGGAAATCGGGTTCAGCAGGAAAAGGTGAAGGATCGAGCTAAGTTTGCGGCTGCTAAGGACGCTGCAAAAGGCAAGGGCAAGGGCAAGGTTGTTGATGAGGATGAAGTCCCAGCAGAAGTTCCACAAAAGTGGAGGGATTACAGTGTTGAGTTTCACTTCCCTGAACCTACTGAACTAACACCTCCTCTGCTGCAGCTTATTGAAGTGAGCTTCAGCTATCCAAATCGACTGGATTTCAGACTCTCAAACGTTGATGTTGGCATTGATATGGGGACTCGAGTAGCCATTGTTGGGCCTAATGGAGCTGGGAAATCGACGCTGCTGAATCTTCTTGCAGGTGACTTGTCTCCATCTGAGGGTGAAGTTCGAAGAAGTCAGAAACTGAGGATCGGAAGATATTCCCAGCACTTTGTGGACCTTCTAACAATGGATGAAACGCCCGTTCAGTATCTTCTTCGTCACCATCCAGATCAGGAAGGACTCAGCAAGCAGGAAGCTGTACGAGCGAAACTCGGTAAGTTTGGATTACCTAGCCATAATCATCTTACCCCCATCGCCAAACTATCGGGAGGGCAGAAAGCTCGGGTGGTGTTCACCTCGATATCCATGTCGAAGCCCCACATTTTGCTATTGGATGAACCCACTAATCATCTAGATATGCAAAGTATCGATGCGTTAGCCGATGCATTGGATGAATTCACTGGTGGAGTTGTTCTTGTTAGTCATGATTCTAGATTGATATCACGCGTATGCGAGGACGAAGAGAGAAGTCAAATATGGGTAGTCGAGGATGGTACCGTCAAAACCTTTGATGGAACTTTTGAGGATTACAAGGACGAGTTGCTGAGAGAAATTAAAGCTGAAGTTGATGATTGA 2157 0.4437 MGRKKADEAGPATKSKKEKFSVSAMLASMDEKPDKPKKVSSSSSKPKAKPAPKVSAYADIDLPPSDDEDGDVMEEEKEQNSGPKRSTQQQRPDLKPLGVSITDKELKKREKKDLLAAHAVELAKQEALKDDRDAFTVVIGSRTSVLDGENDADANVKDVTIENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELIKTRQEVALLNASSVEESADKDDSYEDDAGEKLAELYDKLQLMGSDAAEAQASKILAGLGFTKNMQGGATKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHIYRGNFDDFESGYEQRRKEMNKKFEIYDKQLKAAKRSGNRVQQEKVKDRAKFAAAKDAAKGKGKGKVVDEDEVPAEVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNRLDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPSEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRHHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEERSQIWVVEDGTVKTFDGTFEDYKDELLREIKAEVDD 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1253 718 CDD ABCF_EF-3 159 388 - -
Lele35g1253 718 ProSitePatterns ABC transporters family signature. 315 329 IPR017871 GO:0005524|GO:0016887
Lele35g1253 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 471 706 IPR027417 -
Lele35g1253 718 Gene3D - 458 717 IPR027417 -
Lele35g1253 718 Gene3D - 156 440 IPR027417 -
Lele35g1253 718 FunFam ABC transporter F family member 4 456 718 - -
Lele35g1253 718 SMART AAA_5 183 387 IPR003593 -
Lele35g1253 718 SMART AAA_5 517 693 IPR003593 -
Lele35g1253 718 Pfam ABC transporter 174 343 IPR003439 GO:0005524
Lele35g1253 718 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 491 716 IPR003439 GO:0005524
Lele35g1253 718 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 135 711 - -
Lele35g1253 718 MobiDBLite consensus disorder prediction 1 15 - -
Lele35g1253 718 CDD ABCF_EF-3 491 693 - -
Lele35g1253 718 Pfam ABC transporter 508 643 IPR003439 GO:0005524
Lele35g1253 718 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 159 418 IPR003439 GO:0005524
Lele35g1253 718 MobiDBLite consensus disorder prediction 1 103 - -
Lele35g1253 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 403 IPR027417 -
Lele35g1253 718 Coils Coil 407 427 - -
Lele35g1253 718 FunFam ABC transporter F family member 4 157 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1253 Lele-ChrLele35 18663883 18666039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1253 491 694 Calmodulin-binding Proteins AT2G36910 28.700 2.05e-11 65.9