Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1251 ATGGGCTCCTTATGCTCTAGAGGGACAAATTCACACAATTATGTCGCAGAGAACCATGTCCAGAAACCGAAGAAATCCTCAAAGGCAAAGAGGGATAAAAAACTTGCAATGCAAGAGGAATGCAGTGGATCAAACGATGCTAATACAAGGTTGATATCATCAGATGAAGGGGAGAAGAATGGTGAGACAACAGGGAAACCTGGGAATTCGCAAATTAGAAGTCTCGAAGAAGGATCAAATAGGTTGATGATTGTGAATAGGATAGGTAGTATAAAAAGAGGAGAAAGAGGAGCCCAAGTTCTCGCTGGGTGGCCTTCATGGTTATCTGCTGTTGCAGGAGAAGCCATTAGTGGTTGGATTCCACGTAGATCAGAATCCTTTGAGAAATTAGAGAAGATTGGACAAGGGACATATAGCAACGTTTACAAAGCTAGAGATTTGGAAACAAATAAAATAGTTGCATTAAAGAAGGTTCGATTTGCAAATATGGACCCAGAAAGTGTTCGTTTCATGGCCAGAGAAATCATTATACTACGAAGGCTTGATCATCCAAATGTCATGAAACTTGAAGGCATGATCACCTCAAGGGTTTCTGGCAGCTTGTACCTTGTTTTTGAATATATGGAACATGATCTCACTGGCCTCTCAGCTCTTCCTGGCGTCAAGTTTTCTGAAGAGCAGATAAAGTGCTACATGCAGCAACTATTGAGAGGGTTAGAGCATTGTCACAAGAAGGGAGTACTACACAGAGACATAAAAGGAGCAAATTTGCTAATAGATCATAAGGGCACTTTGAAAATTGCAGATTTTGGGCTTGCCACTGTGGTGGATGGCCAAGCATTGACCAGTAGAGTCGTAACCTTGTGGTACAGATCACCTGAACTATTACTTGGAGCCACCAACTATGGCGTCGCCGTTGACTTGTGGAGCGCCGGTTGCATTCTCGCAGAACTCTTCCACGGCAAGCCTATCATGCCCGGTCGAACCGAGGTGGAGCAATTGCATAAGATATTTAAACTTTGCGGATCGCCTTCTGAGAAATATTGGAAGAAGTCGAAGCTACCACATGCTACCATTTTCAAACCTCAACGTCCTTACAAGCGTGTTGTTGGTGAGACATTCCAGGATTTTCCAGCCTCTGCCCTCAAACTTCTCGACGTGCTTCTTGCTATAGAACCTGACGATCGAGTAACTGCCTCCTCAGCACTTCAGAGCGAGTTCTTCAAGACAGAGCCGCTGCCTTGTGAGCCATCGAGTTTGCCGAGGTATCCACCAAGCAAGGAGTTCAATGTGAAGCTTCGAGAAGAGGAAGCTCGAAGAAAAAAAGGGGCAACGAAGAAAGGAAATGAACAAGAACCCGTCAAGAGTTCTGTAAACCCTAAAGCTGCCCTTCCACCTGATTCTAAGACCCAACTTTCAGCAACCACAGAGGTTTTTGTTTGTGAGAAGAATCGAGCAGGGCCAAAGGCAAAGCGCAGACTGGAGAAGAACGGGTTGCTGATTGAACCGGCAAGCACAAGAGGACCCAAGGTACTGTGCCATTCAGGCCAATCCACGGTGCAGAGCGCCTACATGAAAGTCATGAAGCATGAAGCTGCCGGAGGAGAACGCGAGGTGTTTGTCGGAACCAGGAGAAAGCAGAGAGCCTACTGGAACGCCGCCAACGCCGGCCGTCTGTCCAAGTTCTCTAACTCGGTCAACGCTGACGGCGGCTCCCGGCTCGACGTGATAGCCACCGGCGGAGGGAACTCCTCCGTGTGGGGAGGTGACGGCTTCGGCGAGAGGTATAGACATGCAGCCGCCGGAGAATCCGACCTCTTGATGCCTGCATCCCACAAATCTTGTCTCAACAAACCTCTGTCTAAGGGACATGGAGGGAAGAATGGGAAGATGCAATATTCAGGACCGCTGGTGTCTGCAACGGAGAACTTGGAAGAAATGTTGAAGCAACACGAACAACAAATCCAACAAGTCTTACGTAAAGGTGCTTTGGATCATAAGCGCAAGACTTAA 2013 0.4724 MGSLCSRGTNSHNYVAENHVQKPKKSSKAKRDKKLAMQEECSGSNDANTRLISSDEGEKNGETTGKPGNSQIRSLEEGSNRLMIVNRIGSIKRGERGAQVLAGWPSWLSAVAGEAISGWIPRRSESFEKLEKIGQGTYSNVYKARDLETNKIVALKKVRFANMDPESVRFMAREIIILRRLDHPNVMKLEGMITSRVSGSLYLVFEYMEHDLTGLSALPGVKFSEEQIKCYMQQLLRGLEHCHKKGVLHRDIKGANLLIDHKGTLKIADFGLATVVDGQALTSRVVTLWYRSPELLLGATNYGVAVDLWSAGCILAELFHGKPIMPGRTEVEQLHKIFKLCGSPSEKYWKKSKLPHATIFKPQRPYKRVVGETFQDFPASALKLLDVLLAIEPDDRVTASSALQSEFFKTEPLPCEPSSLPRYPPSKEFNVKLREEEARRKKGATKKGNEQEPVKSSVNPKAALPPDSKTQLSATTEVFVCEKNRAGPKAKRRLEKNGLLIEPASTRGPKVLCHSGQSTVQSAYMKVMKHEAAGGEREVFVGTRRKQRAYWNAANAGRLSKFSNSVNADGGSRLDVIATGGGNSSVWGGDGFGERYRHAAAGESDLLMPASHKSCLNKPLSKGHGGKNGKMQYSGPLVSATENLEEMLKQHEQQIQQVLRKGALDHKRKT 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1251 670 Gene3D Transferase(Phosphotransferase) domain 1 215 448 - -
Lele35g1251 670 PANTHER CELL DIVISION PROTEIN KINASE 125 414 - -
Lele35g1251 670 SUPERFAMILY Protein kinase-like (PK-like) 122 415 IPR011009 -
Lele35g1251 670 CDD STKc_CDK9_like 127 408 - -
Lele35g1251 670 MobiDBLite consensus disorder prediction 1 73 - -
Lele35g1251 670 Coils Coil 637 661 - -
Lele35g1251 670 FunFam probable serine/threonine-protein kinase At1g54610 114 209 - -
Lele35g1251 670 Pfam Protein kinase domain 127 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1251 670 Gene3D Phosphorylase Kinase; domain 1 122 214 - -
Lele35g1251 670 MobiDBLite consensus disorder prediction 412 431 - -
Lele35g1251 670 MobiDBLite consensus disorder prediction 437 469 - -
Lele35g1251 670 FunFam probable serine/threonine-protein kinase At1g54610 210 448 - -
Lele35g1251 670 ProSiteProfiles Protein kinase domain profile. 127 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1251 670 ProSitePatterns Protein kinases ATP-binding region signature. 133 156 IPR017441 GO:0005524
Lele35g1251 670 SMART serkin_6 127 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1251 670 MobiDBLite consensus disorder prediction 1 17 - -
Lele35g1251 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1251 Lele-ChrLele35 18649641 18653789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1251 119 453 Core Cell Cycle Gene Families AT5G10270 51.558 1.15e-119 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lele35g1251 Pkinase 1.6e-71 CL0016