Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1247 ATGTCGCAGCAATTTGCTTCAGGAGAACGTTCCCATTATCTTCAATTAGAGCAGCGGTACGTTTTCCGTGAAGCCATGGCCCTGATCCTATACCCTGGGAGAAACGCAAGCAAGAATGGCTACAAGGCACTCATTGCAGCAGAATATGTAGGCGTGCAAATTAAAGTGGCCGAAGATTTTGAGATGGGTGTCTCTAATAAAACACCTGAATTTCTCAAGATGAATCCTATTGGCAAGGTTCCTGTTTTGGAAACACCAGATGGTCCAATATTTGAGAGCAATGCAATTGCACGTTATGTTGCTCGCTTGAAGTCTGATAGTCCATTATATGGAAGCTCTCCAATTGATTATGGCCACATTGAACAATGGATCGATTTTTCTTCATTGGAGATTGATGCTAATCTTCGCACTTGGTTCATACCAAGAATGGGATATGCTCAATATATTGCCCCGGTTGAAGAGTCTGCAATTTCTGCATTGAAGAGAGCATTGGGCGCTTTGAACACTTACCTTGCCTCTAATACTTTCTTGGTTGGGCATTCTGTGACTCTGGCTGACATCATCATGACATGCAATCTGTATTTTGGTTTCAATCGTGTCATGACTAAGAGCTTCACCTCAGTGTTTCCTCATGTTGAGAGATACTTCTGGACCTTGGTCAACCAGCCAAAATTCCAAAAAATTATAGGTGAGGTCAAGCAGACTGAAGCTGTTCCTCCTATTCAGTCTGCGAAGAAGCCTTCCCAGCCCAAAGAATCGTCTAAACCCAAAAAGGATGAACAAAAGAAAGAGACTAAGAAAGAGGCCCCAAAAGCAGAAAAACCTGCAGAAGAAGCTGAAGAGGAGGCACCAAAGCCCAAGCCCAAGAATCCCCTGGACCTTCTTCCTCCAAGTAAGATGATATTGGATGAGTGGAAAAGACTCTACTCAAACACCAAAACCAACTTCCGTGAGGTTGCAATCAAAGGATTTTGGGACATGTATGATCCTGAGGGATACTCTCTTTGGTTTTGTGATTACAAGTACAACGAAGAGAATACCGTTTCCTTTGTGACGATGAACAAGGTCGGAGGATTCCTTCAGAGGATGGATCTGGCTCGCAAGTATGCATTCGGGAAGATGCTCGTGATCGGTTCTGAACCACCATTCAAGGTGAAGGGATTATGGCTATTCCGTGGGCAAGAAATCCCTCAGTTTGTGATTGATGAGTGCTATGACATGGAGCTCTACGATTGGACCAAGGTTGACATCTCAGATGAAGCTCAAAAGGAGCGTGTCAATCAGATGATTGAAGATTATGAGCCTTTTGAGGGACAGCCTCTTCTGGATGCCAAATGCTTCAAGTGA 1347 0.4395 MSQQFASGERSHYLQLEQRYVFREAMALILYPGRNASKNGYKALIAAEYVGVQIKVAEDFEMGVSNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKSDSPLYGSSPIDYGHIEQWIDFSSLEIDANLRTWFIPRMGYAQYIAPVEESAISALKRALGALNTYLASNTFLVGHSVTLADIIMTCNLYFGFNRVMTKSFTSVFPHVERYFWTLVNQPKFQKIIGEVKQTEAVPPIQSAKKPSQPKESSKPKKDEQKKETKKEAPKAEKPAEEAEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNEENTVSFVTMNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPQFVIDECYDMELYDWTKVDISDEAQKERVNQMIEDYEPFEGQPLLDAKCFK 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1247 448 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 113 241 IPR010987 -
Lele35g1247 448 Gene3D - 106 241 - -
Lele35g1247 448 CDD GST_C_EF1Bgamma_like 116 236 - -
Lele35g1247 448 SFLD Glutathione Transferase (cytosolic) 37 216 IPR040079 -
Lele35g1247 448 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 26 448 IPR044628 GO:0004364
Lele35g1247 448 SUPERFAMILY eEF1-gamma domain 288 448 IPR036433 GO:0003746|GO:0006414
Lele35g1247 448 SUPERFAMILY Thioredoxin-like 25 111 IPR036249 -
Lele35g1247 448 FunFam Elongation factor 1B gamma 25 100 - -
Lele35g1247 448 Gene3D Glutaredoxin 25 100 - -
Lele35g1247 448 Pfam Glutathione S-transferase, N-terminal domain 26 102 IPR004045 -
Lele35g1247 448 SFLD Main (cytGST) 37 216 - -
Lele35g1247 448 Pfam Glutathione S-transferase, C-terminal domain 154 223 IPR004046 -
Lele35g1247 448 SMART EF1G_2 287 395 IPR001662 GO:0003746|GO:0006414
Lele35g1247 448 Coils Coil 262 282 - -
Lele35g1247 448 FunFam Elongation factor 1-gamma 1 288 448 - -
Lele35g1247 448 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 27 108 IPR004045 -
Lele35g1247 448 Pfam Elongation factor 1 gamma, conserved domain 287 395 IPR001662 GO:0003746|GO:0006414
Lele35g1247 448 MobiDBLite consensus disorder prediction 250 288 - -
Lele35g1247 448 MobiDBLite consensus disorder prediction 239 295 - -
Lele35g1247 448 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 288 448 IPR036433 GO:0003746|GO:0006414
Lele35g1247 448 FunFam Elongation factor 1 gamma 106 242 - -
Lele35g1247 448 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 288 448 IPR001662 GO:0003746|GO:0006414
Lele35g1247 448 SUPERFAMILY GST C-terminal domain-like 99 239 IPR036282 -
Lele35g1247 448 CDD GST_N_EF1Bgamma 31 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1247 Lele-ChrLele35 18630138 18633557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1247 26 448 Eukaryotic Initiation Factors Gene Family AT1G57720 74.941 0.0 627