Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1239 ATGGCAGGAGAAAGTGGCGGTGTTGGTGCTGGTGATGACTCGGGAACATTGTCTCCGAAGAATAAAATTAAGTTCTTATGCAGCCATGGCGGGAAGATTCTTCCGAGAACCGGCGATGGTATGCTGAAGTACGTCGGCGGTGAGACACGTGTCATTGGGGTGCCTCGCGACATAAATTTCTCAGAGTTTATGAAGAAAGTCACTGAGCTAACTGATAGTGACATGGTCTTCAAGTACCAACTTGTCACTGAAGATCTAGATGCCTTGGTCACAGTGAGATCGGATGCAGATCTCCAGTACATGTTTCATGAGCATGATCGCCATGGGAGCGGAGCTCCAATGCTTCGAGCTTTTCTGTTTCCTTCCAAACCAATTGTACTAGAGAACCAGTCATCTGTTTCTGAACCACACGCGTCAGAGCAGCATTATATCGATGCCATCAATGGCATCATCCACATCCACCCTAGAGGAAGACATTGTCCTACCAGAGTTGTCTCCTCAGCTTGTTCTTCCCCCAAAAAATCAGATTCCCCAGATGGTCATTCTGTGGATGTAAACCCTGAATCATCATTCTTTATCAGCAATCCGAGGTCATCCATGCAGAGAGTGCGAAGTTCTCCAAGCTTCAGCAGCCTCACCACCCTCCAAGGCAGCCTCAGTAGTCCCAAGTATGAACAAAGTTGTCATCACCACCACCACCACCACCACCCACCTCCCCATGGCAATCCCTTCGCTAGACTGTCATCAGATCCACAAGCTGGGCTTGGGTTCAGAAGGCCCCAACCAGTTTTGTCATTGACAAGGCAAGATAGTGGTAGGAGTAATGGCTTTAACCAGTATTACTCACCGACCAGAAGCAACGGTAACAAAGTGAGTCCAGGTTGCCCCAAGAGTGGAGGACACATCGATGAATCTTATCCACTTTCTGGACATCTTAGGTTTGAGAGATCCAATAGTGCTCCTCGCTCTCCAAGTCCAATATGGGAAGATGTTGCGTTAATGACTACATTGACAAGTGTTGCTACTTTTCAGGTCAGGAATGAACAGAAACAAGATAAGAATGTGAAATTTCGATGGTGCCATGGAATTGAGTACAAAGCCGCAGGCGGGCTTGACAGGGGATCTCGATGA 1131 0.4775 MAGESGGVGAGDDSGTLSPKNKIKFLCSHGGKILPRTGDGMLKYVGGETRVIGVPRDINFSEFMKKVTELTDSDMVFKYQLVTEDLDALVTVRSDADLQYMFHEHDRHGSGAPMLRAFLFPSKPIVLENQSSVSEPHASEQHYIDAINGIIHIHPRGRHCPTRVVSSACSSPKKSDSPDGHSVDVNPESSFFISNPRSSMQRVRSSPSFSSLTTLQGSLSSPKYEQSCHHHHHHHHPPPHGNPFARLSSDPQAGLGFRRPQPVLSLTRQDSGRSNGFNQYYSPTRSNGNKVSPGCPKSGGHIDESYPLSGHLRFERSNSAPRSPSPIWEDVALMTTLTSVATFQVRNEQKQDKNVKFRWCHGIEYKAAGGLDRGSR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1239 376 Pfam PB1 domain 42 121 IPR000270 GO:0005515
Lele35g1239 376 MobiDBLite consensus disorder prediction 161 244 - -
Lele35g1239 376 SMART PB1_new 37 122 IPR000270 GO:0005515
Lele35g1239 376 MobiDBLite consensus disorder prediction 266 293 - -
Lele35g1239 376 MobiDBLite consensus disorder prediction 164 224 - -
Lele35g1239 376 PANTHER OS05G0427100 PROTEIN-RELATED 14 260 - -
Lele35g1239 376 CDD PB1_UP2 26 120 - -
Lele35g1239 376 Gene3D - 43 121 - -
Lele35g1239 376 MobiDBLite consensus disorder prediction 266 307 - -
Lele35g1239 376 SUPERFAMILY CAD & PB1 domains 39 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1239 Lele-ChrLele35 18566032 18568572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1239 22 151 MAP Kinase Kinase Kinase AT5G57610 48.175 7.12e-29 116