Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1235 ATGAGTTCAAGTATAAGTTCAGGCACTCAAAACCAACCTAAAGTTGGCAGTGTTGTTGGGTACCCTATATCTGGTAAAATTATTGATTTTAAGTTCCACTATACTGTTCTCAGATTCCTGTCACTTTTCTCCCCTTTTGCCGAAAATCCATTATTGTCTCCGAGCTTAAAACCTGTCGTCTTTGCTTCTTCGAGTGTTTCCAAACTAAATCTTCATAGAACATATTCCAAGTCCCAACAAAACATGGTCCCCTTGATTGTTCTCACCTTGTTCTGTCTTCTGGGTTCCTGCGTTTCTGCATCCTCTTTGCTCAGTGACTTCCATGCCTTAGCCTCACTCAAACAAGAGTTCCAATTCCCAGACCCTGCTCTAAGTACCTGGAACACCTCAAATTCAAGCTCAGTTTGTTCGTGGGTTGGAATTCAGTGCCACCGTGGTCGAGTAGTGTCGGTGGACTTGATGGATTTGAACCTGTATGGCTCAGTTTCTGCTTCAATTTCGAGACTTGATCGGCTCACCCACCTTTCACTTGCAGGAAATAACTTCACAGGCAGCATTGAGATCACCAACTTGAGCAGCCTTCAGTATCTGAACATCTCGAACAACCAGTTCAGTGGCTCCTTGGATTGGAACTACTTCACCATGGAGAACTTGGAGGTTCTTGATGCCTATAACAACAACTTCACTGCCTTGCTTCCATTGGGGGTTTTGACTTTGAAGAAGCTCAGGTACTTGGATCTTGGTGGGAACTTTTTCTATGGCACAATCCCAGAAAGCTATGGAGATTTAGTGGAGCTGGAATATCTCTCACTTGCAGGAAATGATCTACGAGGGAAACTCCCAGGTGCGTTAGGCAATCTCAGTAACTTAAAAGAGATTTACTTGGGCTATTACAACTCTTTTGAAGGTGGGATTCCAATGGAGTTAGGGAAGTTGGTAAATTTAGTTCACATGGATCTTTCAAGCTGTGATTTGGACGGTCCAATTCCAAAAGAACTGGGAAACTTGATAGAGCTTGACACTCTTTACTTGCATATCAATCAGCTATCTGGGTCCATACCAAAACAACTCGGCAACTTAACCAAGTTGGTGAACCTTGATCTTTCCAGAAACTCACTCACTGGAGAAATCCCACTTGAGTTCGTCAATCTCAGGCAGGTCAAGCTTTTCAATCTCTTGGGAAACAGATTGCATGGTTCCATACCAGACTACATTGCAGAGTGGCCAGATTTAGAGTCACTTGGGCTGTGGAAGAACAACTTCACAGGAGAAATCCCACAGTATCTTGGTCAAAATGGGAAACTGCAAAATATTGATTTGTCCTCTAACAAGCTCACTGGTATAATCCCACCTCACCTTTGTTCCTCAAACCAGCTTAAAATCCTGATTCTCCTAAACAATTTCCTCTTTGGTCCCATACCAGAAAGTCTAGGAACTTGTTACAGTCTCACTAGAGTAAGGTTAGGACAGAACTACCTTAATGGTAGCATTCCCGATGGTTTTCTTTACCTTCCTAACCTAAATTTTGCCGAGTTGCAGAATAACTACTTGTCAGGAACCTTGTCAGAGAATGGAAATAGCTCTTCTCAGCCCGTTAACTTAGGTCAGCTCAATTTGTCAAATAACAGCTTATCTGGTCCTTTACCAGATTCACTCTCAAATTTCTCTTCCATACAGATGCTTTCTCTCAGTGGGAACCAATTCTTTGGTCCAATCCCTTCTTCCATTGGACAACTTCATCAAGTTCTAAGGCTTGATCTTAGCAGGAACTCATTTTCTGGAGAGATTCCACCTGAAATTGGAAACTGTTTCCATCTTACTTATCTTGACATAAGCCAGAACAACCTCTCTGGATCAATACCAAATGAGATTTCCAACATCCACATTCTGAATTACTTGAACTTGTCAAGAAACCATTTGAACGAAACCATCCCAAAGTCAATTGGCGCCATGAAGAGTCTCACTACTGCTGATTTCTCCTTTAACGATTTCTCAGGCAAATTGCCAGAAACAGGGCAGTTCGCCTTCTTCAATGCCTCAGCTTTCGCTGGTAATCCTCAACTCTGCGGTTCTCTCCTGAACAACCCTTGCAACTTCTCCGCAATTAAAACCTCTTCAGGGAAAAGCTTTGCAGATTTCAAGCTCATCTTCGCACTTGGCCTTCTAATTTGCTCCTTAGTGTTCGCCATTGCAGCCATAATCAAAGCCAAATCGTTCAGAAAGAACGGCCCTGGTTCATGGAAAATGACGGCATTTCAGAAAATCGACTTCACGGTCTCCGACATCCTCGAATGCGTTAAAGACGGTAATGTGATTGGAAGAGGCGGCGCCGGGATCGTTTACCACGGGAAAATGCCAAACGGAGGCGAAATCGCAGTGAAGAAGCTTCTAGGATTTGGCGCCAACAGCCACGACCATGGCTTCCGAGCCGAGATTCAAACCCTAGGCAACATCAGGCATAGAAACATCGTGAGATTACTCGCGTTCTGCTCTAACAGAGAGACAAATCTCCTGGTGTACGAATACATGCGAAACGGGAGCTTGGGCGAGGCATTGCATGGGAAAAAGGGATCATTTCTAGGGTGGAATTTAAGGTACAAAATCGCGATCGATGCGGCAAAGGGTCTGTGCTATCTCCACCACGATTGCTCGCCGTTGATCGTTCACCGAGACGTGAAATCGAACAACATTCTCTTGAATTCGAGCTACGAAGCACATGTCGCCGATTTCGGACTCGCCAAGTTCTTGATCGATAGCGGGAATTCAGAGTACATGTCCACCATTGCAGGATCTTATGGCTACATCGCTCCTGAATATGCTTACACCTTAAGAGTGGATGAAAAGAGCGATGTTTATAGTTTTGGAGTGGTGTTATTAGAGTTGATAACAGGGCGACGACCGGTGGGAGATTTTGGAGATGGCGTGGACCTTGTGCAATGGTGTAAGAAGGCAACAAATGGGCGAAAAGAAGAGGTGATGAACATAGTCGATGTGAGACTTTTAGTGGTGGCAAAGGAAGAAGTAATGCACATGTTATTCATTGCCATGTTGTGCTTGCAAGAAAACAGTGTTGTGAGGCCAACGATGCGAGAAGTGGTTCAAATGCTCTCCGAATTTCCTCGCTCGACAGCCTCACAACACGAAAACAACAGCAATAGCTATAGCAGCAACAACAACGACAACAGTCAATCAGCATCTTCATATTCCAAGAACATTATTCCTCCAAGCAAAAGCCTTGAGAAACAAAGCCCTTGTCCTCCAACTTTCAAACAAGACCTTTTGGCTTGA 3288 0.441 MSSSISSGTQNQPKVGSVVGYPISGKIIDFKFHYTVLRFLSLFSPFAENPLLSPSLKPVVFASSSVSKLNLHRTYSKSQQNMVPLIVLTLFCLLGSCVSASSLLSDFHALASLKQEFQFPDPALSTWNTSNSSSVCSWVGIQCHRGRVVSVDLMDLNLYGSVSASISRLDRLTHLSLAGNNFTGSIEITNLSSLQYLNISNNQFSGSLDWNYFTMENLEVLDAYNNNFTALLPLGVLTLKKLRYLDLGGNFFYGTIPESYGDLVELEYLSLAGNDLRGKLPGALGNLSNLKEIYLGYYNSFEGGIPMELGKLVNLVHMDLSSCDLDGPIPKELGNLIELDTLYLHINQLSGSIPKQLGNLTKLVNLDLSRNSLTGEIPLEFVNLRQVKLFNLLGNRLHGSIPDYIAEWPDLESLGLWKNNFTGEIPQYLGQNGKLQNIDLSSNKLTGIIPPHLCSSNQLKILILLNNFLFGPIPESLGTCYSLTRVRLGQNYLNGSIPDGFLYLPNLNFAELQNNYLSGTLSENGNSSSQPVNLGQLNLSNNSLSGPLPDSLSNFSSIQMLSLSGNQFFGPIPSSIGQLHQVLRLDLSRNSFSGEIPPEIGNCFHLTYLDISQNNLSGSIPNEISNIHILNYLNLSRNHLNETIPKSIGAMKSLTTADFSFNDFSGKLPETGQFAFFNASAFAGNPQLCGSLLNNPCNFSAIKTSSGKSFADFKLIFALGLLICSLVFAIAAIIKAKSFRKNGPGSWKMTAFQKIDFTVSDILECVKDGNVIGRGGAGIVYHGKMPNGGEIAVKKLLGFGANSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNRETNLLVYEYMRNGSLGEALHGKKGSFLGWNLRYKIAIDAAKGLCYLHHDCSPLIVHRDVKSNNILLNSSYEAHVADFGLAKFLIDSGNSEYMSTIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELITGRRPVGDFGDGVDLVQWCKKATNGRKEEVMNIVDVRLLVVAKEEVMHMLFIAMLCLQENSVVRPTMREVVQMLSEFPRSTASQHENNSNSYSSNNNDNSQSASSYSKNIIPPSKSLEKQSPCPPTFKQDLLA 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1235 1095 SUPERFAMILY RNI-like 150 470 - -
Lele35g1235 1095 SUPERFAMILY Protein kinase-like (PK-like) 757 1036 IPR011009 -
Lele35g1235 1095 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 735 842 - -
Lele35g1235 1095 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 266 1037 - -
Lele35g1235 1095 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 412 701 - -
Lele35g1235 1095 Gene3D Ribonuclease Inhibitor 395 700 IPR032675 -
Lele35g1235 1095 Gene3D Ribonuclease Inhibitor 105 212 IPR032675 -
Lele35g1235 1095 SMART LRR_typ_2 579 603 IPR003591 -
Lele35g1235 1095 SMART LRR_typ_2 627 651 IPR003591 -
Lele35g1235 1095 SMART LRR_typ_2 263 286 IPR003591 -
Lele35g1235 1095 SMART LRR_typ_2 215 239 IPR003591 -
Lele35g1235 1095 SMART LRR_typ_2 336 360 IPR003591 -
Lele35g1235 1095 SMART serkin_6 766 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1235 1095 Pfam Protein tyrosine and serine/threonine kinase 769 1036 IPR001245 GO:0004672|GO:0006468
Lele35g1235 1095 Pfam Leucine Rich Repeat 605 626 IPR001611 GO:0005515
Lele35g1235 1095 Pfam Leucine Rich Repeat 434 454 IPR001611 GO:0005515
Lele35g1235 1095 MobiDBLite consensus disorder prediction 1040 1095 - -
Lele35g1235 1095 Gene3D Phosphorylase Kinase; domain 1 732 842 - -
Lele35g1235 1095 MobiDBLite consensus disorder prediction 1040 1085 - -
Lele35g1235 1095 Gene3D Ribonuclease Inhibitor 213 299 IPR032675 -
Lele35g1235 1095 Gene3D Ribonuclease Inhibitor 300 394 IPR032675 -
Lele35g1235 1095 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 105 212 - -
Lele35g1235 1095 ProSitePatterns Serine/Threonine protein kinases active-site signature. 887 899 IPR008271 GO:0004672|GO:0006468
Lele35g1235 1095 Pfam Leucine rich repeat N-terminal domain 105 143 IPR013210 -
Lele35g1235 1095 Gene3D Transferase(Phosphotransferase) domain 1 843 1065 - -
Lele35g1235 1095 SUPERFAMILY L domain-like 433 690 - -
Lele35g1235 1095 ProSiteProfiles Protein kinase domain profile. 766 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1235 1095 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 213 299 - -
Lele35g1235 1095 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 300 405 - -
Lele35g1235 1095 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 843 1053 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1235 Lele-ChrLele35 18521448 18529128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1235 99 1053 Receptor kinase-like Gene Family AT5G65700 57.467 0.0 1088
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele35g1235 Pkinase 2.1e-42 CL0016