Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1232 ATGGAGGGATCAAGCGGTTTGAGGAATAAGAAGAATTTAGAGAATTATAAGCTGGGAAAAACAATTGGGAAAGGATCATTCAGCAAAGTGAAAGTTGCAGAGCATACATTGACAGGCCATAAAGTCGCCATTAAGGTTCTGCAACGTCACAAGATCGTGAACAAGCAAATGGAAGAGAAGGTGGAAAGAGAGATAAAGATTTCAAAGATGTTGGTGCATCCTCATATTACAAGAATTTATGAGGTGATAGAAACAGAAACGAAGATATATATAGTGATGGAGTATCTTCAATTTGGAGAGCTCTTTGATTACATAGATAAACAAGGCAGCCTCCAAGAAGATGAAGCCCGTCATTATTTGCAGCAGATAATTAGTGGAGTGGAGTACTGTCACAGGAACATGGTGGTTCATAGAGACCCGAAGCCTGAGAATTTGCTTTTGAGTTCTATAGGCAATATCAAGATCATTGACTTTGGTTTGAGCAACGTCATGCGCGATGGTCACTTTCTTCAAACTAGCTGTGGCAGCCCTAACTACGCAGCTCCTGAGATTCTAGCTGGGAAGCAGTATGCTGGAGCAGAAGTTGACTATTGGAGCTGTGGAAAAATAAAGGGTGGGATATATAGTGTACCGGAGAAAGTATCAAGTGGGGCAAGAGATTTGATAGCAAGGATGCTGGAGGTTGATCCTATGAAGAGGATCACCATATCTGAAATTCGCCGGCACCCTTGGTTCCGAGCTCATATTCCGCGCTATTTAGTGGTGCCACCACCGGATACGGCGGAGCTAGCCAAGAAGGATTCTGGATTCAACAACCCTATTCATCATCATCCCTCTACTCAAGTTGCTGCTCCAACACCAACGATTCATGATGATCATCCCTACGGATCATCTGTTGAGAAAAATTGGACCGTTGGCTTTCAGTGCAGTGGTGATCGTGGCGAGATAATGAAGGAGGTTGTGAATGCAATGAAAGAATTAAATGTGTCGTGGAAGAAGATTAATATTGGACCCTACAACCTCAAGTGCAAGTGGACTGCTTCTGAATCAAATGTTGTCCTCAAGTTTGAGATTCGCCTTTACAAGGTGGATGGGGAGAATTACTTGCTAGATCTGCAGAAGTTGGAGGGCCCTGAGTTTGTATTTTTAGAGCTATGTTTTGCCCTTATGGGGCAGCTTAAGCTCCCTCTTCGTCTTAGTCCTTGTTGGCTAGCCACCCACCCACCACCTTCTTCTTCTTCCTCTACTTTCGCTGCTTCGTTGAAGGGATCAAGCGGTTTGAGGAATAACAAGAATTTAGAGAATTACAGGCTGGGGGAAACAATCGGTCTAGGATCGTTCAGCAAGGTGAAACTTGCAGAGCATCTATTGACAGGCCAAAAAGTCGCCATTAAGGTTATCCAACGTAGTAAGATGAAGGGCAAGCAAATGGAAGAAAAAGATGAATTGGCCTTTGATTATATGTGGTACTTTGATTTGATTCAAATTCTGAACTCTAACCCTGATGATATATGGAACAAGGTGGTTCATAGAGACCTAAAGCCTGAGAATTTGCTGATGAGTTCCTTAGATACTGTCAAGCTCTTTGATTTTGGGCTCAGCAACGTCATGCGTCATGGTCAATTTCTTCAAACCAGTTGTGGAAGCCCTAGCTACGCAGCTCCTGAGATAGTAGATGGAAAGCAGTATGTAGGACCGGAAGTAGACGTTTGGAGCTGTGGGGTGATCCTGTACGGTCTTATATGTGCCGATCTCCCTTTTCATGAGCCAAACCTTGCTTTACTTCTTCAGAAAATCGAGATTGATGATGAAATTATTCAGCAAGTACTTCGCATGGGATTTGACAAGAATAAGCTACTTGATTCTCTCTACAACCTTGAACAGAACGAGGGCACCGTGGCGTACTATCTGTTACTGGACAAACGGTGGTTTCGTGCTTTACGGTGGCTATATTGGGTGCGACATTCAAGAGATAATGGTGATCACTTATTTCTATTCTCTCTCTTACAGTTTCATCGATCAATTTCATCAATTCCCTTTGCTCAATAA 2049 0.4309 MEGSSGLRNKKNLENYKLGKTIGKGSFSKVKVAEHTLTGHKVAIKVLQRHKIVNKQMEEKVEREIKISKMLVHPHITRIYEVIETETKIYIVMEYLQFGELFDYIDKQGSLQEDEARHYLQQIISGVEYCHRNMVVHRDPKPENLLLSSIGNIKIIDFGLSNVMRDGHFLQTSCGSPNYAAPEILAGKQYAGAEVDYWSCGKIKGGIYSVPEKVSSGARDLIARMLEVDPMKRITISEIRRHPWFRAHIPRYLVVPPPDTAELAKKDSGFNNPIHHHPSTQVAAPTPTIHDDHPYGSSVEKNWTVGFQCSGDRGEIMKEVVNAMKELNVSWKKINIGPYNLKCKWTASESNVVLKFEIRLYKVDGENYLLDLQKLEGPEFVFLELCFALMGQLKLPLRLSPCWLATHPPPSSSSSTFAASLKGSSGLRNNKNLENYRLGETIGLGSFSKVKLAEHLLTGQKVAIKVIQRSKMKGKQMEEKDELAFDYMWYFDLIQILNSNPDDIWNKVVHRDLKPENLLMSSLDTVKLFDFGLSNVMRHGQFLQTSCGSPSYAAPEIVDGKQYVGPEVDVWSCGVILYGLICADLPFHEPNLALLLQKIEIDDEIIQQVLRMGFDKNKLLDSLYNLEQNEGTVAYYLLLDKRWFRALRWLYWVRHSRDNGDHLFLFSLLQFHRSISSIPFAQ 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1232 682 SUPERFAMILY KA1-like 284 394 IPR028375 -
Lele35g1232 682 CDD UBA_SnRK1_plant 601 641 - -
Lele35g1232 682 CDD AMPKA_C 303 393 - -
Lele35g1232 682 SUPERFAMILY Protein kinase-like (PK-like) 431 602 IPR011009 -
Lele35g1232 682 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 347 395 IPR001772 -
Lele35g1232 682 FunFam Maternal embryonic leucine zipper kinase 8 204 - -
Lele35g1232 682 Gene3D Phosphorylase Kinase; domain 1 426 495 - -
Lele35g1232 682 Pfam Kinase associated domain 1 353 395 IPR001772 -
Lele35g1232 682 SMART serkin_6 16 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1232 682 SMART serkin_6 436 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1232 682 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Lele35g1232 682 Gene3D Kinase associated domain 1, KA1 306 394 - -
Lele35g1232 682 ProSiteProfiles Protein kinase domain profile. 16 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1232 682 SUPERFAMILY Protein kinase-like (PK-like) 13 265 IPR011009 -
Lele35g1232 682 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 600 640 IPR015940 -
Lele35g1232 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672|GO:0006468
Lele35g1232 682 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 421 474 - -
Lele35g1232 682 ProSitePatterns Protein kinases ATP-binding region signature. 442 465 IPR017441 GO:0005524
Lele35g1232 682 Pfam Protein kinase domain 16 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1232 682 Pfam Protein kinase domain 506 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1232 682 FunFam Non-specific serine/threonine protein kinase 3 97 - -
Lele35g1232 682 SMART uba_6 602 639 IPR015940 -
Lele35g1232 682 ProSiteProfiles Protein kinase domain profile. 302 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1232 682 Gene3D Transferase(Phosphotransferase) domain 1 7 281 - -
Lele35g1232 682 Gene3D Transferase(Phosphotransferase) domain 1 496 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1232 Lele-ChrLele35 18499826 18510596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1232 431 600 CBL-interacting serine-threonine protein kinases AT4G24400 33.945 8.78e-30 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Lele35g1232 Pkinase 4.7e-60 CL0016