Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1219 ATGGAACTATCAGATTTGCAAACCAACTCATCCACTCGTCACCACCACCATCATCACCAGAACAAGCAGCAGCAGCAGCAGGTTTCCTCCACGACGTCGTCTCAGGTTGTGGTCCCCAGTTTCGATGGCAGACCTTCGCCTTCTTCGTCTTCGTCTTCCGCTTCTTCATCATTCATGGGCTCCATCTCCATCCAAGCTGGACTTTCTTCTTCGACGACGTCGTCTTCTTCTGTTTCCTTATCCAATAATTCTTCTTCTGTTTCTGCCACCACGGCTTTGCCTTCTGCTACTTCGGGTTCTGGTTCTGGTTCTAATGCGTCCGCTGCTCCGCACCTCATTGATGCTTCTTTGGCTATCGCTACCAGATCTGACGCCCACCCGCCGGCTCGGCCTGGAGGGGTTGTGGATGCTGTGAAGAAGACTCAAATTCAGCAGCAATTGTCGATTTCTACGGCGGTGACGGCGGCTACGAACAAGAGGTCTACCAAGGATAGGCATACCAAGGTGGATGGACGTGGACGGAGAATTCGAATGCCGGCGACTTGTGCGGCTAGGGTTTTTCAGTTGACGAGGGAATTGGGGCATAAGTCCGATGGTGAGACAATTGAGTGGCTGCTGCAGCAGGCGGAGCCGGCGATCATCGCTGCTACCGGTACAGGCACGATTCCGGCGAATTTCTCGACACTCAACGTGTCGCTTCGGAGTAGTGGGTCGACGATCTCGGCTCCGCCTTCGAAGTCCGCTCCGCATACGTTTCACGGCTCGTTGGCTCTCCCTGCTCATGGTCATCATCATCATCCTTATGAAGAAGCTTTCCAACACACTGCTCTCTTAGGGTTTCATCCTCACCATCACCACCAACAGCAGCAGAATCAACCTCATCTACTGACCGCAAACCAGATTGCGGAAGCGTTTCCGGTAGGCGGAAGAGGCGGTGGGGAGAGTGGCGGCGGTGACGCGCCCGATAACTATTTGAGAAAACGTTTCAGAGAAGATCTGTTCAAAGAAGATAACCAATCACAAAACGAGAGTGGAGGGAGCTCACCCAAGGCATTCAAGAACAATCTACAACAAATCTCGCAGCAACAGGAGGCCGCTGGATCATCGGGCCTTCTCCGTCCTACGAACATGCTACCGGCCGCCGCCACCATGTGGGCGGTGGCACCAGCTCCGGCGAGTGGCGCAGGCAGCACAATCTGGATGTTACCCGTGAACGCCGGCGCGTCCGGTTCAGGTTCATCTCCGGAGACCCAAATGTGGCAGTTTCCGACCGCACAAGCTGGTTCTGCAAACAACACCGTACAAGCGCCTCTGCAATTCATGCCTAGGTTCAATCTTCCGGGGGGCCTTGAATTTCAAGGAGGTGGAGGGAGAGGGGGCTCTCTGCAACTGGGTTCCATGATAATGCCTCATCAACATCATCAGCAACAACAACAACCATCCCAGCATCTCGGGTTGGGTATGTCTGAATCTAATCTGGGTATGTTGGCTGCTCTGAATGCTTATTCTAGAGCTAGTTTGAATATGAATTCTGAGGAAAATCACCCATTGGAGCATCAACATCAACACCATCAGCAGCAGCAGCAGCAAGGAACAGATAGTGGAGATGAAGGTCCTAATAGTTCTCAATGA 1632 0.53 MELSDLQTNSSTRHHHHHHQNKQQQQQVSSTTSSQVVVPSFDGRPSPSSSSSSASSSFMGSISIQAGLSSSTTSSSSVSLSNNSSSVSATTALPSATSGSGSGSNASAAPHLIDASLAIATRSDAHPPARPGGVVDAVKKTQIQQQLSISTAVTAATNKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTISAPPSKSAPHTFHGSLALPAHGHHHHPYEEAFQHTALLGFHPHHHHQQQQNQPHLLTANQIAEAFPVGGRGGGESGGGDAPDNYLRKRFREDLFKEDNQSQNESGGSSPKAFKNNLQQISQQQEAAGSSGLLRPTNMLPAAATMWAVAPAPASGAGSTIWMLPVNAGASGSGSSPETQMWQFPTAQAGSANNTVQAPLQFMPRFNLPGGLEFQGGGGRGGSLQLGSMIMPHQHHQQQQQPSQHLGLGMSESNLGMLAALNAYSRASLNMNSEENHPLEHQHQHHQQQQQQGTDSGDEGPNSSQ 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1219 543 ProSiteProfiles TCP domain profile. 162 216 IPR017887 -
Lele35g1219 543 MobiDBLite consensus disorder prediction 510 543 - -
Lele35g1219 543 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 13 502 IPR005333 GO:0003700
Lele35g1219 543 MobiDBLite consensus disorder prediction 23 57 - -
Lele35g1219 543 MobiDBLite consensus disorder prediction 69 107 - -
Lele35g1219 543 MobiDBLite consensus disorder prediction 523 543 - -
Lele35g1219 543 MobiDBLite consensus disorder prediction 236 263 - -
Lele35g1219 543 MobiDBLite consensus disorder prediction 305 324 - -
Lele35g1219 543 MobiDBLite consensus disorder prediction 1 57 - -
Lele35g1219 543 Pfam TCP family transcription factor 161 285 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1219 Lele-ChrLele35 18413284 18414915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1219 159 492 TCP Transcription Factor Family AT1G35560 47.024 1.44e-67 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele35g1219 TCP 3.2e-38 No_clan