LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele35g1215	ATGCCTAAACTTTCGACTTTCCTGTTCTTCTCCTCAGTAGTCGTCATCGTCTTCGTCTCCATCTCACCTCTTTCCTATAATGAGGACACTTACGATGTGAGGGTATCAATACACAACTGGCAACTATACCGACACGTGGAGAAGCCGGGTTGGAGGCTAAGTTGGGCATGGAGAGGTGATGAGGCGATTTGGAGCATGACAGGAGCAGAGGCAACAGAGCAAGGGAGCTGTTCAAGGTTTAAGGGACAAAACAAGCCACATTGTTGTGATAAGCAACCAACCATCATTGATCTTATGCCTGGCACTCCTTATAATAAGCAAGTTCCCAATTGTTGTAGACAAGGAATCCTATCATCTCTCACTCAAGATCCCACCCAAATCACTTCCATGTTTCAGATGAATTATAATAAGCCCTCAATTTCAAACCCTAACAACATTACCGTGCCCGATAATTTCAGCCTTGAAATCCCCGGTTACTCCTGTAGTGAACCTACTCAGGTCCCTCCTAGCAAGTTCACTACTGATGGTCGTCGATGGACACAAGTTCTTAAAACATGGAATGTGACATGTATATACTCTCAATTCTTATCATCATCAGCCCCAAAATGTTGTGTGTCATTGTCTGCTTTCTACAGTGACACCATTGTTCCTTGCCCTAAATGCAGCTGTAATTGCCAAGGCCTACCAGGAGCAAACTGTGTCAACTCTGTTAAAGCTCCTTCATTGTTGAAACTGCCACAAGATGATAGCACACAAGAGACAGAACCAGTGGTGAGGTGTTCACAGCACATGTGCCCTATTAGGATTCACTGGCATGTGAAGCAGAGTTATACAAAGTATTGGAGAGTGAAGCTCACAATCACAAATTATAACCTTGTGAAGAACTATTCTCAGTGGAATCTTGTCCTCTTACACCCCAACTTGCAGAGTTTAACACAAGTCTTCAGCTTCAACCACCAACCTCTTAGAATTTTTGGGGATATCAATGATACAGTGATGTTCTGGGGGATAAAGTACTACAATGACATGTTGCTGACACATGGGGAGAATGGGAATGTGCAAACAGAGATTTTACTTCACAAAGATGCTGGAATCTTCACCTTTAATGGAGGATGGGGTTTTCCCAGAACTGTTTTATTTAATGGAGATGATTGTGTTATGCCTAGTCCTGATAATTACCCTACCCTCCCCAATGATGCTTCTTTTCCCTCTTCTTCTTTCTTGCTTTTCTTATCTTTTATCCTCTCAATATTGTTATTCATAGGGTTCTGA	1272	0.4253	MPKLSTFLFFSSVVVIVFVSISPLSYNEDTYDVRVSIHNWQLYRHVEKPGWRLSWAWRGDEAIWSMTGAEATEQGSCSRFKGQNKPHCCDKQPTIIDLMPGTPYNKQVPNCCRQGILSSLTQDPTQITSMFQMNYNKPSISNPNNITVPDNFSLEIPGYSCSEPTQVPPSKFTTDGRRWTQVLKTWNVTCIYSQFLSSSAPKCCVSLSAFYSDTIVPCPKCSCNCQGLPGANCVNSVKAPSLLKLPQDDSTQETEPVVRCSQHMCPIRIHWHVKQSYTKYWRVKLTITNYNLVKNYSQWNLVLLHPNLQSLTQVFSFNHQPLRIFGDINDTVMFWGIKYYNDMLLTHGENGNVQTEILLHKDAGIFTFNGGWGFPRTVLFNGDDCVMPSPDNYPTLPNDASFPSSSFLLFLSFILSILLFIGF	423

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele35g1215	423	Pfam	COBRA-like protein	31	193	IPR006918	GO:0010215\|GO:0016020
	Lele35g1215	423	PANTHER	PROTEIN COBRA	24	413	IPR006918	GO:0010215\|GO:0016020
	Lele35g1215	423	PIRSF	COBRA	15	423	IPR006918	GO:0010215\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele35g1215	Lele-ChrLele35	18373959	18378113	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele35g1215	24	421	COBRA Gene Family	AT3G29810	52.357	1.06e-152	438