Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1204 ATGGAGAATAAGGATTCAGAATCCAGCTTGAAACATCAGAAAGATGAAGACTTGGAACAGCCTCATCTTGAAGAAGACTACGAGTCTCCAACTTTCAATCTTCAAAACGTTTCAAAAGTGATACTTCCTCCATTGGGAGCTTCAAGTTATAATGATCAGAACACAGCTCACTCCAAACGATGGATCATATCCCCAATGGATACAAGATACAGGTGTTGGGAGAGTCTGATGGTGGTGCTGGTAGGATATTCAGCATGGGCGTATCCCTTTGAGATAGGGTTTCTGATGTCTTCTCCAACACATAAACTCTACATTGTGGATAATGTCATTGATCTCTTCTTTGGTGTTGATATTGTTCTCACTTTCTTCCTTGCTTACATTGATCGTTCCACTCAACTTCTTGTTCGAGACCCCAAACAAATTGCCCTCAGGTACTTGTCAACATGGTTTGTGATGGATGTGGCATCAAGCATACCATATGAGGCATTGGGCTATTTGTTCACTGGCAAACGCAGGGTGGGTCTTACTTTCTTCCTCTTGGGCATCCTTAGACTTTGGAGGCTTCGAAGAGTCAAGCAATACTTCACCAGGCTTGAGAAAGACATCAGATTCAACTATTTTTGGATCAGATGTGTTAGACTTCTCTGTGTAACATTTTTTATAGCACACTGTGGTGGGTGTCTGTATTACCTACTAGCTGACGTGTATCCTGATTTAGGGAAGACATGGATTGGAACAATAAATCCAAATTTCAAAGAGAAAAGCATTTGGATTAGATACATATCAGCCATGTATTGGTCTCTCACCACCATGACCACTGTTGGCTATGGTGACTTCCATGCTGTCAACCCCATGGAAATGGCCTTCACCATTTGTTATATGCTCTTCAATCTTGGCCTCACTGCTTACTTAATTGGCAACATGACCAATCTTGTTGTCAAAGGAACTTCTCGTACCATGGAATTTAGAAACAACATTGAAGCAGCATCATATTTTGTGAGCAGAAATAGAGTATCAGCGAGGCTAAAAGAGCAAATAATTGCTTATATGTGCTTAAGATACAAGGCAGAGAGTTTAAACCATCATCAGCTTATGGAACAACTTCCCAAATCAATACGCAAAACCATTTGTCAACACTTGTTCCTTCCAGCTGCTCAAAAAGTTTATCTTTTTAAAGGTGTCTCAAGAGACATCTTGTTGTCCTTGGTTGCAAAAATGAAGGCAGAGTATATACCACCAAAAGAAGAAGTTATCATGCAAGGTGAAGCAGCAGAGGATGTTTATGTAATAGTGTCTGGAGAAGTGGAGATCATTGATTGTGTAATGAGCAAAGAGAAAGTTTTAGGGGTTTTACAAAGATGGGACATGTTTGGAGAAGTTGGTGCACTTTGTTGTAAGCCTCACAGCTTCGCTTACAGAACCAAGACTCTCACACAGCTCTTGAGGCTCAAAACCAGTGATTTTACTGAGACAATGCAGACCAAAAAGGAAGACAACAGACTAATGCTAGAAAATTTCCTTCAGCACTTGAAGAAGCTACACGATGTAAATGCTAGGGAATTGGTGATTGATTGGAGTAGAGAAGATGATCCGAATATGGCAGTGAACTTGTTACATGTGGCCTCAACTGGAAATGCTGCATTTCTTGAAGTGCTTTTGAAGGCTGGCTTGGATTCTAGCGTTGCAGACTCCAAAGGCAAAACCCCATTGCACATAGCAGCATTAAATGGCCACGAGGAGTGTGTAAAAGTGTTACTTAAGCATGCATGCAACGTACATGCAAGAGATATAAATGGCGACACTGCACTATGGGACGCCATAGCTTCAAAGCATTATTCAATATTCAGAGTCCTGTATCAGCTTTGTGCGCTCTCTGATCCACACACAGCAGGCGATCTTCTTTGTAAAGCAGCAAAGAGGAATGAGGTAACAGTAATGAGTGAGCTTATAAAGCAAGGGTTGAACATAGAGTCCAAAGATCACCATGGTTTAACGCCAATGCAAGTTGCCTTGCAACAGAATCACGTGGACATGATTCAATTGCTTTTCATGAACGGCTCAGATGTTGTTGCAGCTCTTAATAACCATGAAGGAGAGCAGCAGCACAACATTTGGGGAAGATATAATAGTAATAATAGGCAAATCCCTTCAAGAGTTAGCATATTTAGAGGTCATCCTATATTGAGAATACAACAAGGTTGCGTTGAAGCTGGCAAGATGATAAGCTTCCCTAACTCAATTGAGGAGCTCAAGAGAATTGCAGGTGAAAGATTTGGGTTTGATGCAAAAGAAGCAATGGTGACTGATGAAGGAGGAGCAGAAATAGACACTATTGATTTGATCAGAGATAATGATAAACTTTTTATTGTCTAA 2373 0.4079 MENKDSESSLKHQKDEDLEQPHLEEDYESPTFNLQNVSKVILPPLGASSYNDQNTAHSKRWIISPMDTRYRCWESLMVVLVGYSAWAYPFEIGFLMSSPTHKLYIVDNVIDLFFGVDIVLTFFLAYIDRSTQLLVRDPKQIALRYLSTWFVMDVASSIPYEALGYLFTGKRRVGLTFFLLGILRLWRLRRVKQYFTRLEKDIRFNYFWIRCVRLLCVTFFIAHCGGCLYYLLADVYPDLGKTWIGTINPNFKEKSIWIRYISAMYWSLTTMTTVGYGDFHAVNPMEMAFTICYMLFNLGLTAYLIGNMTNLVVKGTSRTMEFRNNIEAASYFVSRNRVSARLKEQIIAYMCLRYKAESLNHHQLMEQLPKSIRKTICQHLFLPAAQKVYLFKGVSRDILLSLVAKMKAEYIPPKEEVIMQGEAAEDVYVIVSGEVEIIDCVMSKEKVLGVLQRWDMFGEVGALCCKPHSFAYRTKTLTQLLRLKTSDFTETMQTKKEDNRLMLENFLQHLKKLHDVNARELVIDWSREDDPNMAVNLLHVASTGNAAFLEVLLKAGLDSSVADSKGKTPLHIAALNGHEECVKVLLKHACNVHARDINGDTALWDAIASKHYSIFRVLYQLCALSDPHTAGDLLCKAAKRNEVTVMSELIKQGLNIESKDHHGLTPMQVALQQNHVDMIQLLFMNGSDVVAALNNHEGEQQHNIWGRYNSNNRQIPSRVSIFRGHPILRIQQGCVEAGKMISFPNSIEELKRIAGERFGFDAKEAMVTDEGGAEIDTIDLIRDNDKLFIV 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1204 790 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 417 433 IPR018488 -
Lele35g1204 790 ProSiteProfiles Ankyrin repeat profile. 565 597 IPR002110 GO:0005515
Lele35g1204 790 Gene3D Helix hairpin bin 315 380 - -
Lele35g1204 790 SMART cnmp_10 390 507 IPR000595 -
Lele35g1204 790 Pfam Ion transport protein 71 319 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele35g1204 790 ProSiteProfiles Ankyrin repeat region circular profile. 565 596 - -
Lele35g1204 790 FunFam Potassium channel KAT3 72 314 - -
Lele35g1204 790 ProSiteProfiles KHA domain profile. 718 790 IPR021789 -
Lele35g1204 790 Pfam Ankyrin repeats (3 copies) 538 619 IPR002110 GO:0005515
Lele35g1204 790 PANTHER POTASSIUM CHANNEL AKT1 34 789 IPR045319 GO:0005249|GO:0006813
Lele35g1204 790 ProSiteProfiles Ankyrin repeat profile. 662 694 IPR002110 GO:0005515
Lele35g1204 790 SUPERFAMILY cAMP-binding domain-like 317 510 IPR018490 -
Lele35g1204 790 PRINTS EAG/ELK/ERG potassium channel family signature 286 297 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele35g1204 790 PRINTS EAG/ELK/ERG potassium channel family signature 107 117 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele35g1204 790 PRINTS EAG/ELK/ERG potassium channel family signature 118 127 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele35g1204 790 PRINTS EAG/ELK/ERG potassium channel family signature 304 313 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele35g1204 790 PRINTS EAG/ELK/ERG potassium channel family signature 260 277 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele35g1204 790 SUPERFAMILY Voltage-gated potassium channels 65 313 - -
Lele35g1204 790 Gene3D Jelly Rolls 386 519 IPR014710 -
Lele35g1204 790 FunFam Potassium channel KAT2 378 514 - -
Lele35g1204 790 Gene3D - 71 314 - -
Lele35g1204 790 SMART ANK_2a 533 561 IPR002110 GO:0005515
Lele35g1204 790 SMART ANK_2a 598 629 IPR002110 GO:0005515
Lele35g1204 790 SMART ANK_2a 565 594 IPR002110 GO:0005515
Lele35g1204 790 SMART ANK_2a 662 691 IPR002110 GO:0005515
Lele35g1204 790 MobiDBLite consensus disorder prediction 1 22 - -
Lele35g1204 790 CDD CAP_ED 390 503 IPR000595 -
Lele35g1204 790 Gene3D - 534 706 IPR036770 -
Lele35g1204 790 PRINTS Ankyrin repeat signature 566 581 IPR002110 GO:0005515
Lele35g1204 790 PRINTS Ankyrin repeat signature 678 692 IPR002110 GO:0005515
Lele35g1204 790 ProSiteProfiles Ankyrin repeat region circular profile. 662 689 - -
Lele35g1204 790 SUPERFAMILY Ankyrin repeat 531 691 IPR036770 -
Lele35g1204 790 Pfam KHA, dimerisation domain of potassium ion channel 718 789 IPR021789 -
Lele35g1204 790 ProSiteProfiles cAMP/cGMP binding motif profile. 390 509 IPR000595 -
Lele35g1204 790 Pfam Cyclic nucleotide-binding domain 410 494 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1204 Lele-ChrLele35 18268393 18277267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1204 1 570 Ion Channels AT4G22200 64.828 0.0 771