Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1180 ATGAGAAGAGAGAAAGTTGCAGAGATCATGGGAATTGATCTCTCTCTGAAGATTAATGATGCTAAACCAAAAGAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGAGAAGAGGAGAGAGAAAGAAGAATATTATTTGATGAGAAGGGAAAGGAGAAGAAGGATAATAAGGAAGAAGAAGCAGCTGAACAGATCACAGAAGGTGAAATAGAAGACGATGATGATGCATCAGTTGAAGAAGATGAAAGCCTAGCCTCCACCAAGGTCCGTATAGTAATTTCAAAGTTTTTTTCTGTGTTATGTATATCTTCAACATTACAATCAACAATAATCAAGTTGGCTCTTTGGACAAATTTCATTACATATGATGCATATTCTGAGCTAAGAGAGTTAAAAATGGAGATGGATTGTCTAAAAGAGGAAAACAAAGTGTTGAGGATAGTGGTGGAGCAAACCATGAAAGATTATTACCATCTCCAAATCAAATTCGCAGACATCCATCCTCCTCTCAACAATATTATTAACAAAAAGGATCCTCAAATCTCTCTCTCACTTCAAGGCAACAATAATAATAATATTGGAAACACAAGCACAAGTAGTGAAGAAGGACCACTACCACCACCGACAAGAATACCTCTTTCTTCAAACGCTAATATTAAGGATAGTATTAGTGAGAATGATTTGGGATTATCACTAAGGTTACATACAAGTGCAGAAGACCATCATCATCAAGATCGAGGCAATATTATTATTAATAATCACGAACAAGAATTGTTGGCTTCTTCTTCTTCGTCACTGCAAAACAATAAGCTGATCGATAATGGGATTCATCATCATCATCACTTGCCTGCTGTTACTGCTTCTCCTCCAAATAGAAAGACTAGGGTTTGTGTTAGAGCAAGATGTGACACAGCCACTATGAATGATGGGTGCCAGTGGAGAAAATATGGGCAAAAAATTGCTAAAGGAAATCCGTGTCCTCGTGCCTATTATCGATGTACTGTAGCTCCAGGATGCCCTGTAAGGAAACAGGTACAAAGATGTATAGAGGACATGTCAATCCTAATAACAACCTACGAAGGAACACATAATCATCGTCTACCTGTAGGTGCAACAGCCATGGCTTCTACTGCTTGCACAGCAGCTTCCTTCATGTTCCTTGACTCTTCTTCACAACCCTCTGCTTCTTCTTCCACTGCTTTCAGAACCCTAAACCCTTATAATTTTATCAATAATGCTCCTCCTTCTAAGCCTGGCCTTGCCTTTGATCTCACAAACAACAACCCTAACAAACCGCTTTTCCCTAATCAACCGTCAGGATTTTCTTGGATGTCAAACAGATCAGTACTCAACAGTTTTCTCAGCCCTAGAGATCGAGGGATTGATAATGAGAGAGGTGAAGAAGAAGAAGAAGAAGAATGTGTCAGCTGA 1431 0.3892 MRREKVAEIMGIDLSLKINDAKPKEKEEEEEEEEEREEERERRILFDEKGKEKKDNKEEEAAEQITEGEIEDDDDASVEEDESLASTKVRIVISKFFSVLCISSTLQSTIIKLALWTNFITYDAYSELRELKMEMDCLKEENKVLRIVVEQTMKDYYHLQIKFADIHPPLNNIINKKDPQISLSLQGNNNNNIGNTSTSSEEGPLPPPTRIPLSSNANIKDSISENDLGLSLRLHTSAEDHHHQDRGNIIINNHEQELLASSSSSLQNNKLIDNGIHHHHHLPAVTASPPNRKTRVCVRARCDTATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIEDMSILITTYEGTHNHRLPVGATAMASTACTAASFMFLDSSSQPSASSSTAFRTLNPYNFINNAPPSKPGLAFDLTNNNPNKPLFPNQPSGFSWMSNRSVLNSFLSPRDRGIDNERGEEEEEEECVS 476
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1180 476 Coils Coil 21 48 - -
Lele35g1180 476 MobiDBLite consensus disorder prediction 17 81 - -
Lele35g1180 476 MobiDBLite consensus disorder prediction 38 63 - -
Lele35g1180 476 SUPERFAMILY WRKY DNA-binding domain 300 368 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele35g1180 476 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 127 438 IPR044810 GO:0003700
Lele35g1180 476 MobiDBLite consensus disorder prediction 64 80 - -
Lele35g1180 476 FunFam probable WRKY transcription factor 31 292 369 - -
Lele35g1180 476 Gene3D WRKY domain 292 369 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele35g1180 476 MobiDBLite consensus disorder prediction 184 216 - -
Lele35g1180 476 MobiDBLite consensus disorder prediction 184 204 - -
Lele35g1180 476 Coils Coil 128 148 - -
Lele35g1180 476 Pfam WRKY DNA -binding domain 308 366 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele35g1180 476 MobiDBLite consensus disorder prediction 454 476 - -
Lele35g1180 476 ProSiteProfiles WRKY domain profile. 302 368 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele35g1180 476 SMART WRKY_cls 307 367 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele35g1180 Lele-ChrLele35 18081323 18084202 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1180 130 394 WRKY Transcription Factor Family AT1G68150 50.929 2.12e-75 239
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele35g1180 WRKY 3.9e-24 CL0274