Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1171 ATGGGTATTTATGATCAAGGTTCTAATATCACTTCTTTACCTTTGGATTCTTCTAGGAAGAGGAAAAGTCGTAGTAGGCGTGATGGTTCTAAATCTGTGGCTGAGACTCTTGCAAAGTGGAAAGAATATAATGGATATCTCAAATCTAGCAAAGGTGAGAGCAAACCAAGTCGCAGAGCCCCGGCCAAAGGATCAAAGAAAGGATGTATGAAGGGTAAAGGTGGGCCTGACAACTCAAGGTGTAACTACAGAGGCGTGAGACAAAGAACCTGGGGAAAATGGGTTGCTGAGATTAGGGAACCAAACCGAGAAAGTAGGCTGTGGTTGGGTACATTTGCTACTGCCTATGAAGCTGCTCTTGCTTATGATGAAGCTGCTAGAGCCATGTACGGTCCTTGTGCCCGCCTCAATTTTCCCTACATATCGGATTATACTTCTTGCAAGGACTCCTCACCGGCTACAACTTTATCAAGTTCTTCTGTGGCAACTCCTGCAAAATCAATGAAATGGATTATGTTCATCTTGAATCTGATGAAGTCGCCTCTGGAAGGTGATTACTTGCAGAATTTCTCTATGGATGAGATGTTTGATGTGGATGAACTTTTGGGGGCTATGGACAAGAATCCAGTTGATGACTATGAAACGTTCCTGCACTTTCTGATTCAGCTTTGCCTTTGCCCTTTGATTTCTTCTTATGCTTGCTACTGCTGCATCCTGGGTGTCGTATTTGATTATGTTCTCATAAATCTGATCGATGGTGGCTTTAATGTTGTCTATTTTTTCTGCCACATGGTGCAGAAGCTTTGCATGGTGAACACCATGGAGCATCCTGCACAACCAACTTCGCCTTCGGTGATTGGCAACGTTTGCAACAAAGGTGTCGATGACATCCTCAGCTTCATGTGCGACATCTGTGATTTGACGGACAACCTCTTGTTCTATTTCCTTCTTACTCTTGTTCTGCTAGGAGCTCTTAAGGAAGACAGTCATCATTCTGAGCTCACTCTCAAGGAACTTCACTTTGTCTTCCACGCCACATGGCAAATTGGCTTCGTGTGCCACAAGCCGAGACATGTTCTCCAGCACGAAAGGAACTACGCTTTCTGCCATGAAGTGTGCACGACCAACAGAAGAACACAGAAACAAAAGAAGCAAAATGTGAAGCACAAGACAACGCCAAGACGTTCAAGGATTTAA 1197 0.4419 MGIYDQGSNITSLPLDSSRKRKSRSRRDGSKSVAETLAKWKEYNGYLKSSKGESKPSRRAPAKGSKKGCMKGKGGPDNSRCNYRGVRQRTWGKWVAEIREPNRESRLWLGTFATAYEAALAYDEAARAMYGPCARLNFPYISDYTSCKDSSPATTLSSSSVATPAKSMKWIMFILNLMKSPLEGDYLQNFSMDEMFDVDELLGAMDKNPVDDYETFLHFLIQLCLCPLISSYACYCCILGVVFDYVLINLIDGGFNVVYFFCHMVQKLCMVNTMEHPAQPTSPSVIGNVCNKGVDDILSFMCDICDLTDNLLFYFLLTLVLLGALKEDSHHSELTLKELHFVFHATWQIGFVCHKPRHVLQHERNYAFCHEVCTTNRRTQKQKKQNVKHKTTPRRSRI 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1171 398 SMART rav1_2 82 145 IPR001471 GO:0003700|GO:0006355
Lele35g1171 398 MobiDBLite consensus disorder prediction 1 33 - -
Lele35g1171 398 Pfam AP2 domain 81 131 IPR001471 GO:0003700|GO:0006355
Lele35g1171 398 Gene3D AP2/ERF domain 82 140 IPR036955 GO:0003700|GO:0006355
Lele35g1171 398 FunFam Ethylene-responsive transcription factor 2 81 140 - -
Lele35g1171 398 ProSiteProfiles AP2/ERF domain profile. 82 139 IPR001471 GO:0003700|GO:0006355
Lele35g1171 398 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 18 163 - -
Lele35g1171 398 SUPERFAMILY DNA-binding domain 82 140 IPR016177 GO:0003677
Lele35g1171 398 MobiDBLite consensus disorder prediction 47 81 - -
Lele35g1171 398 CDD AP2 81 140 IPR001471 GO:0003700|GO:0006355
Lele35g1171 398 MobiDBLite consensus disorder prediction 17 33 - -
Lele35g1171 398 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Lele35g1171 398 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Lele35g1171 398 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1171 Lele-ChrLele35 18034758 18037373 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1171 19 161 AP2-EREBP Transcription Factor Family AT2G40340 59.184 2.77e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele35g1171 AP2 2.5e-14 CL0081