Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1164 ATGGAGCATCCTGGACAACCAACTTCTCCTTCGGTGATTGGCAACGTTGGCAACAAAGGTGTCGATAACTTTCCCAGCTTCATGTGCGACACCTGTGATTTGACGGACAACCCCTTGTTCTATTTCCTTCTTACTCTTGTTCTGCTCGCAGCTCCTGGGAAGACAGTCATCATTCTGAGCTCACTCTCAAGGAACTTCACTTTGTCCTCCACGCCACATAGCAGATTGGCTTCGTGTGCCACAAGACGAGACAGTTTAAGCGATAGAGATAGAATGAAGGATGGTGTGAAGGGAACAGTGTTAATGGTTATAGTTCAGATGGTGTATGCAGTGGCGAATATATTGATAAAAATGGCAGCAAATGATGGAATGAGCTTGACTGTTCTTGTTGCTTACAGATTCCTCTTGTCAACTTCCTTCATTGTTCCTCTTGCTCTCTTCTTTGAAAGGGACAGCTTCCAAAAAGTTAATGGCATGGTTCTATTCCAAGCTTTTCTTTGTGGCTTATTTGGGGGATCTTTACTACATAATCTCTATGCTCAATCCTTGGCCTTGGTATCTGTAACATATGTCACAGCTATGTTGAACCTTGTTCCTGCTACTACCTACATCATGGCTGTCTTATTTAGGTTGGAGAGGATGGATTTGAGAACCAGAGGAGGGAAGGCTAAGGTGTTAGGGACATTGATAGGAATCGGTGGAGCCATGATCCTTACTTTCGTCAAAGGCAAAAGAATCCAAATCTGGACGACTCATATTCACCTCTCCGACCACGTGGCATTATCACATCCCTCCACTGCTTCTTCTCGGTTGTGGGGCTACCTTCTTGCTCTTGCCACCTGCGTCAGTTACTCCTTGTGGTTGATCGTCCAGGCGAAGATGACGCAGAGATTTCCATGGCACCATTCAAGCACAGCTTTAACGTGTGCAATGGGCTCACTCCAATCTGTTGTTGCTGCACTTTGCATTGAGAGAGATTGGAATCAGTGGAAGCTTGGCTGGAACATCAGGCTCCTCACTGCGGCTTTTACGGGAATATTGACTTCTGGGGTGGCTTATACCCTAATAGCATGGTGCGTGATCAAGAAGGGACCATTGTTTGTGGCCATTTTCAATCCTCTCATGCTTGTGCTCGTCACACTTGGTGGTTCTTTGGTACTTGATGAGCCTCTCTATGTTGGAAGTGTAATAGGAATAGTGTTGGTGGTGTGGGGATTGTACATGGTGTTGTGGGGTAAGAGCAAGGAATCAAACAAGGCATCATCAGATCAGCAATCAAGAGCCTCTCTTCCATGTAGTGATGATCATACTATCCAAATTTCTAAACGACCTCATATCAGTGCCATTATCCCTCAAAACACAACACCCACCTAG 1374 0.4549 MEHPGQPTSPSVIGNVGNKGVDNFPSFMCDTCDLTDNPLFYFLLTLVLLAAPGKTVIILSSLSRNFTLSSTPHSRLASCATRRDSLSDRDRMKDGVKGTVLMVIVQMVYAVANILIKMAANDGMSLTVLVAYRFLLSTSFIVPLALFFERDSFQKVNGMVLFQAFLCGLFGGSLLHNLYAQSLALVSVTYVTAMLNLVPATTYIMAVLFRLERMDLRTRGGKAKVLGTLIGIGGAMILTFVKGKRIQIWTTHIHLSDHVALSHPSTASSRLWGYLLALATCVSYSLWLIVQAKMTQRFPWHHSSTALTCAMGSLQSVVAALCIERDWNQWKLGWNIRLLTAAFTGILTSGVAYTLIAWCVIKKGPLFVAIFNPLMLVLVTLGGSLVLDEPLYVGSVIGIVLVVWGLYMVLWGKSKESNKASSDQQSRASLPCSDDHTIQISKRPHISAIIPQNTTPT 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1164 457 SUPERFAMILY Multidrug resistance efflux transporter EmrE 327 415 - -
Lele35g1164 457 Pfam EamA-like transporter family 271 410 IPR000620 GO:0016020
Lele35g1164 457 Pfam EamA-like transporter family 97 239 IPR000620 GO:0016020
Lele35g1164 457 SUPERFAMILY Multidrug resistance efflux transporter EmrE 132 242 - -
Lele35g1164 457 PANTHER WAT1-RELATED PROTEIN 100 422 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1164 Lele-ChrLele35 17992770 17998413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1164 96 422 Nodulin-like Gene Family AT1G25270 41.390 9.95e-83 257