Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1148 ATGGGCCCTCGTTTGAATCTGGAAGCTGACCAAGAAAATTGGATTGATATGAAGATTATAAGTGCCTCTTCATTTTCAGGACAGAAGGCTCTGCAGTGTGGAGCTAACTACAAGGATAATGCTTATGAAAAGGAAGCATTGCCAATTGAAGAAACTACTTTGCCCAGAGGAAATGAGGATGTGGAAGTTAATATAACTGGGTGTACAAAGTCTAGTGAGCCTTCGATAATTGGAGATACTTGTGATGATGATACTGAGTGTTCAAGTTCTTTTGGCGATACAGGATCTGGCACAGAGAATGCTTCAGCATTTAGTGATGATGAAGTGGTATCGCATATGTATGCCGAAAACCCATTCTCATCCATGTTTTTTCAAGATTGTGAGCCATCTCTAATAAGAAGGAAGAAGTTGACAAGTCATTGGAAGAGTTTCATACGCCCTTTGAGGTGTCGTTGTAAGCAGATAGAATTAAAACTGAAGCAACTTCAATCTCAAGAACGTAAATACGAAAAAGAACTTGCAGCATACGATTACAGAAGGCAGCTTATGTCAGAAAACTTCTCATTAGATGAATGTGATACCAAGTCAGTTCCTTTACGTGAGGGAATTTGTGGGAAAAAAGTAATGAAGAGAAAGAAACGAAAGAGAGTTGAGGAGACATGTAATTTAGCATCTTACACATCTGACCACTGTGTACTCTCATACTATGAAGAAAAGGACTCTGCTGCTCATGCTCGTTTGAAAAATGTCAAAGTTGTTGCTGAAGCACGGAATCCTGAGAGTAATGAGGAGTTCAAGGGGAATGACATATCCTCTCATCTTGAGAATGACTTATCGATGTCTTCTCTTGACCATGATGATACTGATAGAACCTTGGTGAAGATCTTTGAAAAGATTGAAACAGCACAATCTGAAGTTCACAAATTGAGAACTCGAATTGATAAGGTTGTTAATGAAAATGTGGGGAAGTCCATCTCTGTAAATAATTTGAACCCGCTTGGACTTGATCCATCCAATGACTTGAATCTCTACTATACCAATTCTGCTTCACCTTCCACAATCAAAAACACATTATCTGAGAGAAATCAGTTAATGAGAAAAACCAAAGAATCTGTTGAAGAGCAGAAGCCAGTTCCCCTCGCTCTAGCTTCAGCTCCTTGCTTGGTTGCCAAGAATACTTTACCTATTTTTCGGCCTAATAGTTTGAAAGTTTGTTCTCCTTTAAAATTCAGTTTCTTTGGGAAGAAAAGAGGTAAAAGGAAGAAAGCCGGATCAAACTGGAAGGCTGGAGCTGGTCTGTCAATACCAAAACTTAAGAAACTGGTGAATGTTCCAAAGACCAAGAAGACTTACTGCAAGAATAAGGAGTGCAAGAAGCACACCTTGCACAAGGTCACACAGTACAAGAAGGGCAAGGATTCCCTTGCAGCTCAGGGAAAGCGCCGTTATGACCGTAAACAGTCAGGTTATGGTGGACAAACAAAGCCTGTGTTCCACAAAAAGGCTAAAACCACCAAGAAGATTGTCTTGAGGCTGCAATGCCAGAGTTGCAAGCATGTATCCCAACATGCTATTAAGAGGTGCAAGCACTTTGAGATCGGAGGGGACAAGAAGGGGAAGGGAACTTCTCTGTTTTAG 1638 0.4054 MGPRLNLEADQENWIDMKIISASSFSGQKALQCGANYKDNAYEKEALPIEETTLPRGNEDVEVNITGCTKSSEPSIIGDTCDDDTECSSSFGDTGSGTENASAFSDDEVVSHMYAENPFSSMFFQDCEPSLIRRKKLTSHWKSFIRPLRCRCKQIELKLKQLQSQERKYEKELAAYDYRRQLMSENFSLDECDTKSVPLREGICGKKVMKRKKRKRVEETCNLASYTSDHCVLSYYEEKDSAAHARLKNVKVVAEARNPESNEEFKGNDISSHLENDLSMSSLDHDDTDRTLVKIFEKIETAQSEVHKLRTRIDKVVNENVGKSISVNNLNPLGLDPSNDLNLYYTNSASPSTIKNTLSERNQLMRKTKESVEEQKPVPLALASAPCLVAKNTLPIFRPNSLKVCSPLKFSFFGKKRGKRKKAGSNWKAGAGLSIPKLKKLVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1148 545 Coils Coil 152 179 - -
Lele35g1148 545 MobiDBLite consensus disorder prediction 470 497 - -
Lele35g1148 545 Pfam Ribosomal protein L44 459 534 IPR000552 GO:0003735|GO:0005840|GO:0006412
Lele35g1148 545 ProSitePatterns Ribosomal protein L44e signature. 503 514 IPR000552 GO:0003735|GO:0005840|GO:0006412
Lele35g1148 545 MobiDBLite consensus disorder prediction 470 488 - -
Lele35g1148 545 CDD AT4G37440_like 59 319 IPR038745 -
Lele35g1148 545 FunFam 60S ribosomal protein L44 441 545 - -
Lele35g1148 545 Coils Coil 355 375 - -
Lele35g1148 545 Coils Coil 299 319 - -
Lele35g1148 545 PANTHER ELONGATION FACTOR 27 333 - -
Lele35g1148 545 Gene3D - 441 545 - -
Lele35g1148 545 SUPERFAMILY Zn-binding ribosomal proteins 442 534 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1148 Lele-ChrLele35 17852845 17858354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1148 441 545 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 94.286 4.70e-65 205