Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1146 ATGACCAAACTCATACTCATGTTTGCCACGTGGATTGCTGCAGGTAAGGCTTTGGGAGAAGGGAATCAATGGTACTACTTCAGCAGAAGGACACAGAATAGGGTCACTAATAATGGCTATTGGAAGTCAATGGGAATGGAAGAGCCAATACTTACAAACTCAGGAAGTACAACTATTGGAGTGAAGAAATATTTCATCTTCTTCATGGGAGAATCTCCTTCTGGATTACTGTAA 234 0.4103 MTKLILMFATWIAAGKALGEGNQWYYFSRRTQNRVTNNGYWKSMGMEEPILTNSGSTTIGVKKYFIFFMGESPSGLL 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1146 77 ProSiteProfiles NAC domain profile. 1 77 IPR003441 GO:0003677|GO:0006355
Lele35g1146 77 SUPERFAMILY NAC domain 11 75 IPR036093 GO:0003677|GO:0006355
Lele35g1146 77 Gene3D NAC domain 3 76 IPR036093 GO:0003677|GO:0006355
Lele35g1146 77 Pfam No apical meristem (NAM) protein 14 72 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1146 Lele-ChrLele35 17817207 17819121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1146 8 76 NAC Transcription Factor Family AT3G15510 35.065 3.85e-13 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele35g1146 NAM 1.1e-06 No_clan