LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele35g1113	ATGGCTGAGGAGGGGGATCGTGAGAGAGGTGAAATCGATGGTGGATTCTCGATGGACTCCACCGAATCCAGATGGGTTTTCCAGGAGGATGAGGATGAGGATGATTCGGAGATAGAGGAAGATGAGGCAGATTCGCGGTATCAGTACATGTTGGACTCGGAGGATGAGGAAAATGGCGAGCAAAGGCTAATGCGTACGGGCCCGCGAATCGACTCATTCGATGTTGAAGCTCTTGAGGTTCCTGGTGCTCAGAGAAATGACTATGATGAGGTTGATATCAGTGTGGGAAGGGGAATAGTATTAGCTTTTCAAACCCTTGGTGTTGTCTTTGGTGATGTTGGGACAAGTCCGTTGTATACTTTCAGCGTTATGTTTAGAAAAGCTCCTATAAAAGAAAATGAAGACATTCTTGGAGCATTATCACTTGTTCTGTACACCTTATTCTTGATTCCTCTTGTGAAGTATGTCCTGATTGTTTTGTGGGCCAATGATGATGGTGAAGGTGGTACTTTTGCCTTGTACTCGTTAATTTGTCGTCATGCTAAGGTGAGTCTTTTGCCGAATCAGTTGCCATCTGATGCCCGCATATCAAGCTTTAGGCTAAAGGTTCCATCCCCTGAGCTTGAACGGTCTTTAAAAATCAAGGAAAGATTGGAGACTTCACTGACTCTAAAGAAGATTCTACTTGTATTAGTGCTTGCTGGTACTTCTATGGTGATAGCTAATGGGGTTGTTACACCAGCTATGTCAGTACTTTCATCTGTTGGAGGTTTGAAAGTTGGGGTGGATGCGATTGAACATGATGAAGTGGTGATGATTTCTGTTGCCTGCCTCATCGTTTTGTTCAGTGTACAGAAGTATGGAACAAGTAAAGTGGGGCTTGCTGTAGGACCTGCTTTATTCATATGGTTTTGTTCTCTTGCGGGCATTGGGATATACAATCTCCTCAAATATGATACCACTGTCTTGAGGGCATTTAATCCAATTCATATTTATTACTTCTTCAAGAGGAATTCTACTAAAGCATGGTATTCTCTTGCGGGCTGTCTTCTTTGTGCTACTGGTTCTGAGGCCATGTTTGCAGATCTTTGCTATTTCTCTGTACGATCAGTTCAGCTTTCTTTTGTCTTTCTTGTTTTGCCATGCCTAGTATTGGGTTACTTGGGTCAAGCGGCATACCTTATGAAAAACCATGCTGATGCTGGTCAGGCCTTTTTTTCTTCTGTTCCAAGTGGGGCGTTCTGGCCAGTTTTTCTCATTGCTAATATTGCTGCACTAATTGCAAGTCGTGCTATGACAACAGCCACTTTTTCATGCATAAAACAATCAACTGCACTTGGCTGTTTCCCTCGTCTTAAAATCATTCACACTTCGCGCAAATTTATGGGCCAGATCTATATCCCTGTCATAAACTGGTTTCTTTTGGCTGTTTCACTAGTGTTTGTCTACTCTATATCCAACATTGATGAGATTGGGAATGCATACGGCATTGCTGAGATCGGGGTGATGATGATGACAACTATTTTAGTAACCCTTGTTATGCTTCTTATATGGCAGATCCACATCATCATAGTGTTGAGTTTTGTGGTAGTGTTCTTGGGATTGGAATTGACTTTCTTTTCATCAGTATTGTGGAGTGTAGGAGATGGAAGTTGGATAATATTGGTCTTTGGCGTAATAATGTTTCTTATCATGTATATATGGAATTATGGAAGCAAGCTCAAGTATGAAACTGAAGTCAAGCAAAAGCTGTCAATGGATCTAATGCGAGAATTGGGTTCCAATCTTGGGACAATTCGAGCTCCTGGGATAGGTTTACTGTATAATGAGTTGGTTAAAGGAATTCCAGCAATTTTTGGTCATTTTCTTACTACTCTTCCAGCAGTACACTCCATGGTTATATTTGTGTGCATCAAGTATGTTCCAGTCCCTATGGTGCCTCAAAGTGAAAGGTTCCTTTTCCGGCGGGTCTGCCCAAAAAGCTACCATATATTTCGTTGTATTGCCAGATATGGTTATAAAGATGTTCGCAAAGAAAATCACCAGGCTTTTGAGCAGTTGCTAATAGAGAGCCTGGAGAAGTTCATACGTCGAGAGGCTCAAGAGCGATCACTGGAAAGTGATGGGGATGATGATTCAGATGCAGAGGAAGAGAATTCTGTTTCAAGGGTTCTCATAGCTCCCAATGGGAGTGTCTACTCACTTGGTGTTCCTCTTTTGGCTGATTTCCAGGATACACACAACCCCATTTTAGATGCAAGCACATCACAAGAGGTTAACCCAGCATCGTCAAGTCCCCCAGTGTTTGATGCAGAGCAAAGTCTCGAAAGGGAGCTTTCTTTTATACGAAAAGCGAAAGAGTCTGGAGTTGATAAGTTTGTGCAAGTCTCTGTTTTAACTGCTTCTTGTTATAGCTTTGTCTTTCTTCTGAGAGATGTACTGATTAGACCACAAATGAATTGA	2463	0.421	MAEEGDRERGEIDGGFSMDSTESRWVFQEDEDEDDSEIEEDEADSRYQYMLDSEDEENGEQRLMRTGPRIDSFDVEALEVPGAQRNDYDEVDISVGRGIVLAFQTLGVVFGDVGTSPLYTFSVMFRKAPIKENEDILGALSLVLYTLFLIPLVKYVLIVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLETSLTLKKILLVLVLAGTSMVIANGVVTPAMSVLSSVGGLKVGVDAIEHDEVVMISVACLIVLFSVQKYGTSKVGLAVGPALFIWFCSLAGIGIYNLLKYDTTVLRAFNPIHIYYFFKRNSTKAWYSLAGCLLCATGSEAMFADLCYFSVRSVQLSFVFLVLPCLVLGYLGQAAYLMKNHADAGQAFFSSVPSGAFWPVFLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLAVSLVFVYSISNIDEIGNAYGIAEIGVMMMTTILVTLVMLLIWQIHIIIVLSFVVVFLGLELTFFSSVLWSVGDGSWIILVFGVIMFLIMYIWNYGSKLKYETEVKQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAVHSMVIFVCIKYVPVPMVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERSLESDGDDDSDAEEENSVSRVLIAPNGSVYSLGVPLLADFQDTHNPILDASTSQEVNPASSSPPVFDAEQSLERELSFIRKAKESGVDKFVQVSVLTASCYSFVFLLRDVLIRPQMN	820

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele35g1113	820	TIGRFAM	kup: potassium uptake protein	101	720	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele35g1113	820	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	91	800	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele35g1113	820	MobiDBLite	consensus disorder prediction	1	60	-	-
	Lele35g1113	820	MobiDBLite	consensus disorder prediction	43	60	-	-
	Lele35g1113	820	Pfam	K+ potassium transporter	102	675	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele35g1113	820	MobiDBLite	consensus disorder prediction	26	42	-	-
	Lele35g1113	820	MobiDBLite	consensus disorder prediction	1	15	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele35g1113	Lele-ChrLele35	17454076	17462623	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele35g1113	1	790	Inorganic Solute Cotransporters	AT5G09400	78.164	0.0	1215