Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1105 ATGGCGGAGCGAGCTTCTTATGGTGTGGGTCATCGATTAGATCTTCAGCAATTACAAAATGAAGCCCAGCATCGGTGGTTGCGGCCTGCTGAAATATGTGAAATTCTCCGCAATTATCGGATGTTTCAAATTACTTCAGAACCTCCAAGCAGGCCCCCAGGTGGTTCACTTTTTCTGTTTGATCGGAAAGTTTTGAGATATTTTAGAAAGGATGGACATAATTGGAGGAAGAAAAAAGATGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACATTGCTACTATGCCCATGGGGAAGAAAATGAAAATTTTCAGAGGCGAAGTTATTGGATGCTTGAACCCGACATGATGCATATAGTTTTTGTTCACTACTTGGAAGTAAGGGGTAACAGAACAAGTATTGTAGGAAATACTGATAGTGATGAGGTTACGTCAGGAAATAGCAGATCTCCATCTCCATCATCTGGTTTTCCTATTAATTATGGTAATATGCCTTCAAGAAGCACAGATGCCATGAGCCCAACTAGCACTTTATCTTCCTTATGTGAAGATGCTGATTCAGGTGATCATGGACAGCCATCGGTTTCTGGAACAAATTATATCCCACTTGTTCAGGGAGAAAAAACCGGAGGAAGCAATGTATCCTTTGTTGAGGGCCAAAATGTCCATGGCATGGCCTCCTGGGACAGTGTGTTGGACCTATGTACTGCAGGATTACACACTGATCCAAATCTTGCATCATTTGATTCTGTCCCACCCTATTCAGTCGGGAACATTCTTGAACAAGAAACTGCTCTAGGTGATCTTTTAGCAAGTAAGGGTAACCTAGCTGAGGAGGCAGGGAAATCTCAGTCTTTTCAATCAAATTGGCAGATTCCTTTTGAAGACAATTCAGGACAGATGCATAAATGGCCAATAACCCAATTGTTGAGTTCTGAATATGGATCTCATTTTACCCCTGGTTTACTAGAGCATGAATCTCATACAGCAGGTCCTGAAATTGCTTCTGACCTGTTAACTTTTAATGGACAGATAAGAGAACAGCTGTTACAGGAAAACTTTTCAGAACAGCATACAGATGCACAATATCAATTTTCTCTGAAATCTAATTCTGAGAATGAGAATGCTTTCACTATGAAACGCCCATTATTAGAGGGAGATGATAGCCTGAAGAAAGTTGACAGCTTTTCTCGGTGGGTTAGTAAAGAACTTCCAGAGGTGGATGATCTTCGTATGCAATCCTCATCTGGTATTTCATGGAGCACAGACGAATGTGGGCATGTTATAGATGATTCTTCATTGAGTCCCTCCCTCTCACATGACCAGCTGTTCAGCATATATGATTTTTCACCTAAATGGGCTTTTGCTGATTCTGAAACTGAGGTTTTGATCATTGGAACATTTTTGAAGAATCAACCAGTGGTGGCAAACTGCAACTGGTCTTGTATGTTTGGGGAAGTTGAAGTTCCTGCTGAGATTTTGGCCAATGGAGTTTTGTGTTGTCCTGCTCCACCTCATAAGGCTGGAAGGTTCCCCTTCTATGTAACATGTTCCAATAGGTTAGCTTGCAGTGAAGTGAGGGAATTTGATTACAGAGATGGCTTTGCTAAAGATGTAGAAGTTGAAGATATTTACAGCAGCTCATTTGAAATGCTGGTTTATTTGCGATTGGAAGTGTTACTTTCTTCAAAATCAGTGCACCCAAATGACAAGTCATTTGATAATGATGCAGAGAAAAGAAGCTTGATTTATAAGCTTGTTTCATTGAAGGAAGAAGAGGAGTATTTAAATAAGGAAGAGACAGCTTTAGATATGGACATGTCCCAGCAGAAGTTAAAGGAGCAGCAATTTCACAGACAAGTTAAAGAGAAGCTGTACTCATGGCTACTTCACAAAGTAGCTGAAGATGGTAAAGGGCCAAATGTATTAGATGAGGAGGGACAGGGTGTGCTACATCTAACAGCTGCTCTTGGTTATGATTGGGCCATAGCACCGATTATTATTTCTGGAGTTAATATCAATTTCCGGGATGTAAATGGATGGACAGCTCTGCATTGGGCTGCCTCTTGTGGTAGAGAGCGGACAGTTGCTCTTCTTGTCACCATGGGTGCAAACCCTGGAGCGGTGACCGATCCATCTCCAGAATTTCCTTCTGGTAGAGCACCTGCAGATCTTGCTTCTAGCAATGGACACAAGGGAATCTCAGGCTTCCTTGCAGAGTCTTCATTAACTAGCCACCTTGCATGTCTCACAATGGATGACCATAAGAGAGATAGTGGTCAAGAAGCTTCAGGAATGAAAGCAGTACATTCTGTTTCGGAACGTTCTGCAACACCTTTGTTTTATGGTGATGTACCCGATGCTCTATGCCTTAAGGATTCTCTCACTGCTGTTCGTAATGCTACACAAGCAGCTGTTCGTATACATCAAGTGTTCAGAATGCAGTCATTCCAACGGAAGCAGTTAACTGAATATAAGGATGATGAGTTTGGACTGTCAGATCCACGAGCTCTTTCTCTTCTAGGTTCTAAGGCAGGCAAGGCTGGACTGGGAGATGGGTTAGCCCATGCTGCAGCAACACGAATACAGAAGAAGTTTCGTGGCTGGAAGAAGAGAAAAGAATTCCTAATAATTCGTCAAAGAATTGTTAAAATCCAGGCTCATGTTAGAGGGCACCAGGTAAGGAAGCAATACAAGTCAATCATCTGGTCTGTAGGAATCCTGGAGAAAATCATATTGCGTTGGAGACGCAAGGGCAGTGGCTTACGTGGATTTCGACCTGATGCTGCTAACAAGGAACCTGTCCAACCTAGTGAACCTTTGAAAGAGGATGATTATGATTTTCTCAAGGAAGGTAGGAAACAAAGTGAGGAAAAGTTCCAGAAGGCCCTTTTGAGGGTAAAGTCCATGGCTCAGTATCCTGAAGCACGGGCTCAATATCGACGGCTGCTGAATGTTGTTGAGGACTTCCGTCAGACTAAGGCATGCAATATGGACTTGACCGATCCAGAATGTGAAGCAGCTGATTCATATTGA 3060 0.4248 MAERASYGVGHRLDLQQLQNEAQHRWLRPAEICEILRNYRMFQITSEPPSRPPGGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEPDMMHIVFVHYLEVRGNRTSIVGNTDSDEVTSGNSRSPSPSSGFPINYGNMPSRSTDAMSPTSTLSSLCEDADSGDHGQPSVSGTNYIPLVQGEKTGGSNVSFVEGQNVHGMASWDSVLDLCTAGLHTDPNLASFDSVPPYSVGNILEQETALGDLLASKGNLAEEAGKSQSFQSNWQIPFEDNSGQMHKWPITQLLSSEYGSHFTPGLLEHESHTAGPEIASDLLTFNGQIREQLLQENFSEQHTDAQYQFSLKSNSENENAFTMKRPLLEGDDSLKKVDSFSRWVSKELPEVDDLRMQSSSGISWSTDECGHVIDDSSLSPSLSHDQLFSIYDFSPKWAFADSETEVLIIGTFLKNQPVVANCNWSCMFGEVEVPAEILANGVLCCPAPPHKAGRFPFYVTCSNRLACSEVREFDYRDGFAKDVEVEDIYSSSFEMLVYLRLEVLLSSKSVHPNDKSFDNDAEKRSLIYKLVSLKEEEEYLNKEETALDMDMSQQKLKEQQFHRQVKEKLYSWLLHKVAEDGKGPNVLDEEGQGVLHLTAALGYDWAIAPIIISGVNINFRDVNGWTALHWAASCGRERTVALLVTMGANPGAVTDPSPEFPSGRAPADLASSNGHKGISGFLAESSLTSHLACLTMDDHKRDSGQEASGMKAVHSVSERSATPLFYGDVPDALCLKDSLTAVRNATQAAVRIHQVFRMQSFQRKQLTEYKDDEFGLSDPRALSLLGSKAGKAGLGDGLAHAAATRIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQYKSIIWSVGILEKIILRWRRKGSGLRGFRPDAANKEPVQPSEPLKEDDYDFLKEGRKQSEEKFQKALLRVKSMAQYPEARAQYRRLLNVVEDFRQTKACNMDLTDPECEAADSY 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1105 1019 SMART ANK_2a 687 716 IPR002110 GO:0005515
Lele35g1105 1019 FunFam Calmodulin-binding transcription activator 2 447 543 - -
Lele35g1105 1019 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Lele35g1105 1019 FunFam Calmodulin-binding transcription activator 2 862 910 - -
Lele35g1105 1019 Pfam IQ calmodulin-binding motif 864 883 IPR000048 GO:0005515
Lele35g1105 1019 Pfam IQ calmodulin-binding motif 888 907 IPR000048 GO:0005515
Lele35g1105 1019 ProSiteProfiles Ankyrin repeat region circular profile. 687 713 - -
Lele35g1105 1019 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1001 - -
Lele35g1105 1019 Gene3D Immunoglobulins 447 542 IPR013783 -
Lele35g1105 1019 SUPERFAMILY E set domains 454 540 IPR014756 -
Lele35g1105 1019 SMART CG_1_2 18 136 IPR005559 GO:0003677
Lele35g1105 1019 ProSiteProfiles Ankyrin repeat profile. 687 719 IPR002110 GO:0005515
Lele35g1105 1019 ProSiteProfiles IQ motif profile. 863 892 IPR000048 GO:0005515
Lele35g1105 1019 Pfam Ankyrin repeats (3 copies) 633 715 IPR002110 GO:0005515
Lele35g1105 1019 MobiDBLite consensus disorder prediction 144 208 - -
Lele35g1105 1019 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 863 913 IPR027417 -
Lele35g1105 1019 SMART iq_5 885 907 IPR000048 GO:0005515
Lele35g1105 1019 SMART iq_5 862 884 IPR000048 GO:0005515
Lele35g1105 1019 Gene3D - 598 815 IPR036770 -
Lele35g1105 1019 ProSiteProfiles IQ motif profile. 886 910 IPR000048 GO:0005515
Lele35g1105 1019 Gene3D - 863 910 - -
Lele35g1105 1019 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Lele35g1105 1019 SUPERFAMILY Ankyrin repeat 643 747 IPR036770 -
Lele35g1105 1019 MobiDBLite consensus disorder prediction 144 191 - -
Lele35g1105 1019 Pfam IPT/TIG domain 454 532 IPR002909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1105 Lele-ChrLele35 17280335 17290621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1105 1 1019 CAMTA Transcription Factor Family AT5G64220 53.296 0.0 1057
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lele35g1105 CG-1 1.7e-50 No_clan