Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1075 ATGAGTTCATTTAATATGCCAACGTGGTGGAGATTTTGCCCTGAAGATAATGAACTCATTGGAGACTACCTTTATAATAAAGTTATGGAGCAAGAAGTACCTATAGAAGGTGTAATAGTTGAGTGCGATCTTTATGGTAATGAGAATCCATGGAAAATCTGGGAACGTTTTAGTGAATATGTTGTTAAATCATTTCAATGTGAAGATTTGTATGTCTTCACAAAATTAAAGAAGAAGAACCCTAGATCTAAGCATGTGGAGAGGAAGGTGGGATCAGGTTCTTGGGAAGGAGATGCTCTGGCAAAAAAATTCACAATAAATAATTATAATAATATTAATGGAAATATCAATCAATGTGTTGTTGGATTCATGAAGAGGTTTCGGTTTGAGAAAAGTGGAACTGATCAAGATGGCAAATGGATCATGCACGAATATTCTCTTAATCTATCACTATTTCCTTCTCACTTTCAGGTGAAGTATCGATAA 486 0.3457 MSSFNMPTWWRFCPEDNELIGDYLYNKVMEQEVPIEGVIVECDLYGNENPWKIWERFSEYVVKSFQCEDLYVFTKLKKKNPRSKHVERKVGSGSWEGDALAKKFTINNYNNINGNINQCVVGFMKRFRFEKSGTDQDGKWIMHEYSLNLSLFPSHFQVKYR 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1075 161 Pfam No apical meristem (NAM) protein 10 147 IPR003441 GO:0003677|GO:0006355
Lele35g1075 161 Gene3D NAC domain 16 157 IPR036093 GO:0003677|GO:0006355
Lele35g1075 161 PANTHER NAC TRANSCRIPTION FACTOR 56 7 148 - -
Lele35g1075 161 ProSiteProfiles NAC domain profile. 6 161 IPR003441 GO:0003677|GO:0006355
Lele35g1075 161 SUPERFAMILY NAC domain 3 150 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1075 Lele-ChrLele35 17021856 17022341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1075 5 153 NAC Transcription Factor Family AT3G04070 30.464 5.40e-13 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele35g1075 NAM 9.5e-22 No_clan