Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1058 ATGTGCCACTATGACACCTCTAAACCTTATGTAATAGGGAAATTGAGGCAGGTTATTGAAAGACATGATCAGCACTCAGAAATTGAAAGATTATATCATTCATCTGTTTTGTATGAAAAGGAGACCTTCAGCATGCTCAGCAAGGAAGAAGCTCATAAGACTCAGGAATTGAGGCAGTTGAAGGGAGAAGAGCTTGAAGTATTGAACACAAATGAATTACAGAAGCTTGAGAAACAATTAACAAAAGGTTTGAGCCGTGTTGTCAAAGCAAAGGATGAAATGTTCATGAAAGAGATCAATGCGCTCAAGAGAAAGAGAATCCAGCTGAGGGAAGAAAATCAGAGATTGAAACAGGTGAAGAATGTTGAACAAGAACAAGGTCATCATTCATCTGAGTCAGCCAATAATCGCAGCACATCTGATCTTCCACGTGAAGATGATAGTTCAGACGCTTCTCTCAGATTGGGAAATGCTGAAGATCTTAAAACAAAGAAGTGGGGATTTTATCACTCAGATCTTCATCAGTTTAGTGAAGTTGAGTCCCGTATTAGTATTTGA 558 0.3871 MCHYDTSKPYVIGKLRQVIERHDQHSEIERLYHSSVLYEKETFSMLSKEEAHKTQELRQLKGEELEVLNTNELQKLEKQLTKGLSRVVKAKDEMFMKEINALKRKRIQLREENQRLKQVKNVEQEQGHHSSESANNRSTSDLPREDDSSDASLRLGNAEDLKTKKWGFYHSDLHQFSEVESRISI 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1058 185 MobiDBLite consensus disorder prediction 139 155 - -
Lele35g1058 185 ProSiteProfiles K-box domain profile. 36 128 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele35g1058 185 Coils Coil 73 93 - -
Lele35g1058 185 Pfam K-box region 39 118 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele35g1058 185 MobiDBLite consensus disorder prediction 118 155 - -
Lele35g1058 185 Coils Coil 99 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1058 Lele-ChrLele35 16861140 16865084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1058 10 156 MADS-box Gene Family AT2G22540 34.637 2.32e-22 88.6