Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1028 ATGTTGCAGCTTGCTGTTCATCGAGTGAAGAAGTTGAACAATTTGACGACCCAGATCTTCGCTCTGGGAAGTTACCGATTCTCTACGGCTGCTGAGCCATCTTACAGGAAGGGTAATCCACCGGCAACACAAGAAGTTGTGTCAAAACTTCCTTTGACTACAGATGAAGAATTTAAAGCTGCATTATCTACAGCTAAAAGAGCTTTTTCATCATGGCGTAATGCTCCAGTCACAACTCGCCAACGTGTAATGCTGAAATTCCAGGAGCTTATCCGCAGAGATATGGCAAGCATAATGAGATCTTTTGATAAACTCGCTCTGAATGTTACCACTGAACAAGGAAAGACATTGAAGGATGCGCAAGGAGATGTATTCCGTGGGTTAGAGGTGGTGGAACATGCCTGCGGGATTGCAACTTTACAAATGGGGGAGTATGTTTCTAATGTATCACATGGAATTGATAATTACAGCATTAGAGAGCAACTTGGAGTTTGTGCTGGGATATGTCCTTTCAACTTCCCTGCAATGATTCCCTTGTGGATGTTCCCGGTGGCAGTTACCTGTGGGAACACCTTCATTCTAAAGCCATCAGAAAAAGATCCAGGTGCTGCCGTAATGCTTGCAGAATTAGCATTGGAGGCTGGTCTGCCTGAAGGCGTCTTAAATGTTGTCCATGGAACCCATGATATTGTAAATGCTATTTGTGATGATGACAACATCAAAGCTGTATCGTTTGTTGGTTCCAATGTAGCTGGAATGCATATATATTCAAGAGCATCCGCTAAAGGAAAACGTGTTCAATCTAATATGGGAGCAAAAAATCATGCAATTGTCATGCCTGATACAAACGTTGATGCTACTGTGAACGCTTTAGTTGCTGCTGGTTTTGGTGCTGCAGGCCAAAGGTGCATGGCTCTCAGTACAGTTGTTTTCGTTGGAGGATCAAAACCATGGGAATCTATATTAGTGGAGCGTGCCAATGCACTCAAAACGAGTGTTGGAACTGATCCAGATGCAGACCTTGGTCCAGTCATCAGCAAACAGGCAAAGGAGCGCATACACAAATTAATTCAATCTGGTGTTGAAAGTGGGGCCAAACTGCTGCTTGATGGAAGAAATTTAGTGGTAGCTTCTAAACCCTTAACTACTTTAAGCAACCAAGACTTGTTCTTCTCATCCCCCATAAATACAAAGGAAATAGAATCTCATCCTTTAATTGGCAACCTGGTAAAAGTTCCAGGCTATGAATCTGGCAATTTTGTTGGCCCAACCATCTTATCAGATGTCAGTGCAAACATGGAGTGCTACAAGTTCTTCTTTTCATGGAGGTATGGAAATGGTGCTTCTATATTTACTACATCTGGTGTTGCTGCAAGGAAGTTTCAGACCGAGATTGAAGCTGGACAGGTGGGCATCAATGTTCCCATTCCAGTTCCATTGCCCTTTTTCTCATTTACTGGCAACAAGGCTTCATTTGCAGGAGATCTCAATTTCTATGGGAAGGCTGGGGTTAACTTCTATACTCAGATTAAAACAGTGACTCAGCAATGGAAGGATTCTGCTGGTGGTAGCATACTTAACATGGCAATGCCGACCTCTCAAAAATCTTGA 1611 0.4302 MLQLAVHRVKKLNNLTTQIFALGSYRFSTAAEPSYRKGNPPATQEVVSKLPLTTDEEFKAALSTAKRAFSSWRNAPVTTRQRVMLKFQELIRRDMASIMRSFDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGIATLQMGEYVSNVSHGIDNYSIREQLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGAAVMLAELALEAGLPEGVLNVVHGTHDIVNAICDDDNIKAVSFVGSNVAGMHIYSRASAKGKRVQSNMGAKNHAIVMPDTNVDATVNALVAAGFGAAGQRCMALSTVVFVGGSKPWESILVERANALKTSVGTDPDADLGPVISKQAKERIHKLIQSGVESGAKLLLDGRNLVVASKPLTTLSNQDLFFSSPINTKEIESHPLIGNLVKVPGYESGNFVGPTILSDVSANMECYKFFFSWRYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTVTQQWKDSAGGSILNMAMPTSQKS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1028 536 Pfam Aldehyde dehydrogenase family 443 513 IPR015590 GO:0016491
Lele35g1028 536 Pfam Aldehyde dehydrogenase family 40 372 IPR015590 GO:0016491
Lele35g1028 536 SUPERFAMILY ALDH-like 32 517 IPR016161 GO:0016491
Lele35g1028 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 272 484 IPR016163 GO:0016620
Lele35g1028 536 CDD ALDH_F6_MMSDH 41 517 IPR010061 GO:0004491
Lele35g1028 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 40 512 IPR016162 GO:0016491
Lele35g1028 536 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 26 277 - -
Lele35g1028 536 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 39 378 IPR010061 GO:0004491
Lele35g1028 536 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 296 307 IPR016160 GO:0016491
Lele35g1028 536 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 35 377 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1028 Lele-ChrLele35 16257955 16269897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1028 41 501 Aldehyde Dehydrogenase Gene Family AT2G14170 70.332 0.0 676