Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1022 ATGGCAGCTAATAGCCAATCAAGTAACAATCCTCCTCCTCCTCATTTTCTTCTTCCTTCTCTGGAACTCGTTACCACCATAACCCTGTTATTCTTTCTCATATACCCTTCTGTTTCTTCACTTTCCTTCAATTATGAACACTTCAAGAAGAATGATCCAACCTTAAGTTTTGAAGGAGATGTTCACTATGATGAAAATGGATGCCTGAACCTCACAAAGTTAGAGAAAGACAGCGTTGGGAGAGTCACCTACTTCGAAAATCTCCATCTCTGGAATGAGATAACAGGAAAAGTCACAGATTTTTCTTCCCATTTCTCCTTCATCATCAATACACAAGGCAAGGCTCCCAATCTTGGAGATGGCATCACCTTCTTCCTTGCAGCACCAAGCTTCCCCCTTCCTGATCCTAGAGATGGAGCCGGAATCGGCCTCGTGAGTCGTGGGCAACTGAAGAATCCGAACTACAGAAAGCAACATCCTTTTGTGGCTGTGGAGTTCGACACGTTCCCAAATAATGATTTGGATCCACCTTATGATCATGTGGGGATTGATATTAATTCTATAAGCACAAAGCATACTACCAAAAAGTGGTTCAACGTTAAGGATGGGAGAAGATATGATGCTGTGATCAAGTACGATTCAAGTGTTTTCAATTTGAGTGTAAGTTTTATTGGGTATATGAATGGATCTAGAATTGAAGAGAATTTATTTCATATTGTCAATTTGGCTCATGTTCTTCCACAGTGGGTTGAGTTTGGATTCTCTTCCGCAACAGGAATTTTACATGATGAGATCCATGCTCTTTGCTCTTGGTCCTTCGGTCCAAATTTAGACAAGGAAGATCAGAACAAGGGAGGACTAATACAAGCATTGAGCATAGGATTAGGTGTTTCACTATGGGGAATAGGGTTAATTTGGTTTATGATTTGGAATATCAGAAGAAGAAGAGGAAGAGGAAGAAGAAGCGTTGATGGTTTTGGCTTTGAGCTAATAAGCATGGAAGATGAGTTTCAGAGAATCATAGGGCCTAATAAGTTTCCATATAAGCAGCTTGTAAAAGCAACAGACAACTTTACACAAGAGAATAAGCTTGGAGAGGGAGGATTTGGTGGTGTTTACAAAGGGTTTGTTGAAGAATTGAACAGTTATGTTGCTATTAAGAAGATATCACAAGGATCTAAACAAGGCATTAAGGAGTATGCATCAGAGGTAAAGATCATCAGTCAACTGAGGCATAAAAATCTGGTTCGACTAATCGGGTGGTGCCATGAGCACAATGACTTAATGCTTGTCTACGAGTTCATGCAAAACGGAAGCTTAGATTTTCATCTCTTCAAAGGAAAAAGTCTCTTGACATGGGAACAAAGATATAACATCGCTCGAGGCTTGGCCTTGGCATTATATTACCTCCATGAAGAGTGCGAACAATGTATAGTTCATAGGGACATAAAAGCAAGCAATGTTATGTTAGATCCAAACTTCAACACGAAGCTTGGAGATTTCGGGTTGGCTAGACTCGTGGACCATGCAAAAGGGTCTAAAACAACAGATCTAGCGGGAACATTCGGATATATGGCTCCTGAATATATCTCAAAAGGAAAAGCTAGCAGAGAGACAGACGTGTACAGTTTTGGAGTCGTAGCTTTGGAAATAGCTTGTGGGAGAAAAGCAATCAAACACAGCGCCGACGAAGAACAGGTTTTACTTGTGGATTGGATTTGGGAACTCCATAGCAGAGAAAGCGTTCTCGAAGCAGCCGATCCGAGATTGTGTGGAGACTTCAATGAGCAGGAAATGCTGAGGTTGATGATGGTGGGATTATGGTGTGCTTATCCAGATCATATTCTAAGGCCTCCTATAAGACAAGTAGTTCAAATTCTTAATTTTGAAGCTCCTTTACCAAATCTTCCATCACAGAAGCCTGCACTTGCAAATGATTCTGTTAGACTCAGTGAATTTACATCTTCAAGCTCTTCATCAAGTACTTCTAGGATCAATCATAGCTTACCTTTAAGTGATGGCTTTTTCACTGGTTCATCACAATCAAGCATCTCTCCAGTAGATCCCATTCTGCATACATACTGA 2085 0.4067 MAANSQSSNNPPPPHFLLPSLELVTTITLLFFLIYPSVSSLSFNYEHFKKNDPTLSFEGDVHYDENGCLNLTKLEKDSVGRVTYFENLHLWNEITGKVTDFSSHFSFIINTQGKAPNLGDGITFFLAAPSFPLPDPRDGAGIGLVSRGQLKNPNYRKQHPFVAVEFDTFPNNDLDPPYDHVGIDINSISTKHTTKKWFNVKDGRRYDAVIKYDSSVFNLSVSFIGYMNGSRIEENLFHIVNLAHVLPQWVEFGFSSATGILHDEIHALCSWSFGPNLDKEDQNKGGLIQALSIGLGVSLWGIGLIWFMIWNIRRRRGRGRRSVDGFGFELISMEDEFQRIIGPNKFPYKQLVKATDNFTQENKLGEGGFGGVYKGFVEELNSYVAIKKISQGSKQGIKEYASEVKIISQLRHKNLVRLIGWCHEHNDLMLVYEFMQNGSLDFHLFKGKSLLTWEQRYNIARGLALALYYLHEECEQCIVHRDIKASNVMLDPNFNTKLGDFGLARLVDHAKGSKTTDLAGTFGYMAPEYISKGKASRETDVYSFGVVALEIACGRKAIKHSADEEQVLLVDWIWELHSRESVLEAADPRLCGDFNEQEMLRLMMVGLWCAYPDHILRPPIRQVVQILNFEAPLPNLPSQKPALANDSVRLSEFTSSSSSSSTSRINHSLPLSDGFFTGSSQSSISPVDPILHTY 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1022 694 PANTHER - 64 634 - -
Lele35g1022 694 CDD STKc_IRAK 364 628 - -
Lele35g1022 694 Gene3D - 38 290 - -
Lele35g1022 694 ProSitePatterns Legume lectins beta-chain signature. 162 168 IPR019825 -
Lele35g1022 694 FunFam Lectin-domain containing receptor kinase A4.3 435 645 - -
Lele35g1022 694 Pfam Legume lectin domain 40 283 IPR001220 GO:0030246
Lele35g1022 694 Gene3D Phosphorylase Kinase; domain 1 343 434 - -
Lele35g1022 694 CDD lectin_legume_LecRK_Arcelin_ConA 41 277 IPR001220 GO:0030246
Lele35g1022 694 ProSitePatterns Protein kinases ATP-binding region signature. 364 388 IPR017441 GO:0005524
Lele35g1022 694 Gene3D Transferase(Phosphotransferase) domain 1 435 648 - -
Lele35g1022 694 SMART serkin_6 358 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1022 694 ProSiteProfiles Protein kinase domain profile. 358 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1022 694 ProSitePatterns Legume lectins alpha-chain signature. 246 255 IPR000985 -
Lele35g1022 694 Pfam Protein kinase domain 358 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1022 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Lele35g1022 694 SUPERFAMILY Concanavalin A-like lectins/glucanases 39 278 IPR013320 -
Lele35g1022 694 SUPERFAMILY Protein kinase-like (PK-like) 335 629 IPR011009 -
Lele35g1022 694 FunFam L-type lectin-domain containing receptor kinase IX.1 343 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1022 Lele-ChrLele35 16224659 16226743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1022 31 641 Receptor kinase-like Gene Family AT5G10530 45.800 1.10e-168 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele35g1022 Pkinase 2.8e-51 CL0016