Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1019 ATGTTGGTAGTATCAGTTTTCTTCCTCTTGATAACCCATGCCTTTTCCTTAAACTTTAGCTTCACCAGTTTCAAACCCAATGATTATAGCGACATAACCACTGAAAGAGACGCTTACATTGCAGATTCATCCCTCTACTTGGTAAAAAACCAAAATGATCAATCCTCACAGGAAAGTCAAGGTCGAGCCACATATACGCAAGGGATGCGCCTGTGGGACAAAGCCTCCGGGAAACTTGCAAATTTCAAAACCAATTTCACCTTCGTCATTAATTCACTTGGCCGAACTCCTTATGCAGATGGGATGGCCTTCTTCTTAGCCCCTTATGGTTCAAAGCTTCCTGATCCACCAAAAGTGGGAGGAGGTGCTATGGGTCTCATTATTGGTGACGACAAAACGATACTTAATTCAACAGATTATCCATTTGTTGCTGTGGAGTTTGATATCTTTCCAAATTCAAATCCGGGTGCCTGGGATCCTCCGTATGTACATGTGGGGGTCGATAACAATTCTATTCAATCTGTTACTACTGTGCCATGGTCGGCTAATATCACAGGAGGTGGAAAAAATGAGGCTTTGATCAGCTACAATGCAACTACACACAATTTAAGCATCTCCTTCACTAATGGTTCAGATCGTTCTAACAACACTGTGTGGGAACATCTTCATCATACAGTTGATCTACGAAAGTACCTGCCTGAAAATGTTACTTTTGGTTTCTCAGCTGCCACAGGATTCTATTTTGCAACACACAGGATCTATTCATGGAGTTTCTACTCAGAGGACTTCCCAAATGTTCCTCCCATTCCAAGCCCAAGACCAGGTAATTTGAACCCAGACCCCAGCCAAACAAGTAGAAATGCCACAGCACTTGCAATAGGATTAGGGGTTGGAGGGTTTGTTTTAGTCTGTGGGGTGGTATTGTTTGTCTTGTGGAAGAACAAAAAGAAATTGGTAGATGACGAGTCTGTGGAGAATATGAGTGATGATGATTTTGAAAGAGAAACAGGGCCCAAAAAGTACTCATACGCTGAACTAGCAAGAGCTGCAAATTATTTTGAAGACAAGCTTGGACAGGGAGGATTCGGTGGTGTCTACAAAGGTTTTATCAAAGATTTAAACTCGTACGTTGCCATCAAGAGAATATCAGAGGACTCTAAACAAGGGAAGAAGGAGTTTGCCTCAGAAGTAAGAATCATCAGTCAGCTAAGGCATCGAAACTTGGTGCAACTAATTGGTTGGTGTCATGAAAGGAAAGAACTATTGCTAGTTTATGAGTACATGCCAAATGGAAGTTTAGATTCTTATCTCTTCAAGGAACGAAGCTTGCTGACATGGTCAATTAGATTTCAAATAGCTCAAGGCTTAGCCTCTGCATTATTGTATCTGCACGAAGAATGGGAACAATGTGTGGTTCATAGAGACATAAAATCAAGCAACATCATGCTAGATTCCAACTTCAATGCAAAACTTGGAGATTTCGGATTAGCAAGGCTTGTAGACCACGCAAAAGGAGCACAAACTACAGCTTTGGCTGGAACTATGGGCTATATGGCTCCTGAATGTGTCACTACTGGAAGGGCTAGTAAAGAATCTGATGTTTATAGTTTTGGAGTTGTTGCCCTGGAGATAGTTTCTGGAAGAAAACCCATCAACCCCAAGGCCCAGAAGATGAAATAA 1680 0.4179 MLVVSVFFLLITHAFSLNFSFTSFKPNDYSDITTERDAYIADSSLYLVKNQNDQSSQESQGRATYTQGMRLWDKASGKLANFKTNFTFVINSLGRTPYADGMAFFLAPYGSKLPDPPKVGGGAMGLIIGDDKTILNSTDYPFVAVEFDIFPNSNPGAWDPPYVHVGVDNNSIQSVTTVPWSANITGGGKNEALISYNATTHNLSISFTNGSDRSNNTVWEHLHHTVDLRKYLPENVTFGFSAATGFYFATHRIYSWSFYSEDFPNVPPIPSPRPGNLNPDPSQTSRNATALAIGLGVGGFVLVCGVVLFVLWKNKKKLVDDESVENMSDDDFERETGPKKYSYAELARAANYFEDKLGQGGFGGVYKGFIKDLNSYVAIKRISEDSKQGKKEFASEVRIISQLRHRNLVQLIGWCHERKELLLVYEYMPNGSLDSYLFKERSLLTWSIRFQIAQGLASALLYLHEEWEQCVVHRDIKSSNIMLDSNFNAKLGDFGLARLVDHAKGAQTTALAGTMGYMAPECVTTGRASKESDVYSFGVVALEIVSGRKPINPKAQKMK 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1019 559 FunFam Lectin-domain containing receptor kinase A4.3 428 559 - -
Lele35g1019 559 SMART serkin_6 351 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1019 559 Pfam Protein kinase domain 354 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1019 559 FunFam L-type lectin-domain containing receptor kinase IX.1 338 427 - -
Lele35g1019 559 FunFam L-type lectin-domain containing receptor kinase IX.1 15 264 - -
Lele35g1019 559 Pfam Legume lectin domain 16 263 IPR001220 GO:0030246
Lele35g1019 559 Gene3D Transferase(Phosphotransferase) domain 1 428 559 - -
Lele35g1019 559 PANTHER - 36 551 - -
Lele35g1019 559 SUPERFAMILY Protein kinase-like (PK-like) 335 552 IPR011009 -
Lele35g1019 559 CDD lectin_legume_LecRK_Arcelin_ConA 17 260 IPR001220 GO:0030246
Lele35g1019 559 Gene3D Phosphorylase Kinase; domain 1 338 427 - -
Lele35g1019 559 Gene3D - 15 264 - -
Lele35g1019 559 ProSiteProfiles Protein kinase domain profile. 351 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g1019 559 SUPERFAMILY Concanavalin A-like lectins/glucanases 14 263 IPR013320 -
Lele35g1019 559 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524
Lele35g1019 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1019 Lele-ChrLele35 16194952 16196631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1019 7 559 Receptor kinase-like Gene Family AT5G10530 46.549 1.05e-155 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele35g1019 Lectin_legB 1.4e-61 CL0004