Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1005 ATGGATCCTGCTTCAGAAGTCAAGAGAGAAGCAACAGTCTTGAGGCAACAACTTCAAAACCTGCAAAAATGCCACAGGCAATTGATAGGGGAACAACTTTCTGATATGGGTATTAAGGAATTGCAAAATTTGGAAAACCAACTTGAGATGAGTTTAAAAGGTATCAAGATAAAAAAGGGAAATCAAGTTAATCAAGAAAATGTAGAACTCTATAAAAGGATAGAAGTCATTAGTAAAGAAAATGCTGAATTGCGGAAGATTTGTGAAGCAAGAGTTATGAATGAAGAAACTAAGAATTCCGATCCTCCCTACACTATGAGTAACAAAGATGGGTTATATGCTCCTACCAATCTTCAAATGAGCCAGCCACAGTCTCAATATAGGGAACCACCAGCCAAAGCAATGGAACTGAGGATTTTCCTGAAGGAAGATCAAGATTACTGTGGAGAAGATATTTCACTTCAACAAGATAGTTAG 477 0.3711 MDPASEVKREATVLRQQLQNLQKCHRQLIGEQLSDMGIKELQNLENQLEMSLKGIKIKKGNQVNQENVELYKRIEVISKENAELRKICEARVMNEETKNSDPPYTMSNKDGLYAPTNLQMSQPQSQYREPPAKAMELRIFLKEDQDYCGEDISLQQDS 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1005 158 Coils Coil 4 24 - -
Lele35g1005 158 Pfam K-box region 6 88 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele35g1005 158 Coils Coil 38 58 - -
Lele35g1005 158 ProSiteProfiles K-box domain profile. 4 94 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1005 Lele-ChrLele35 15964004 15965973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1005 2 140 MADS-box Gene Family AT3G57230 39.490 1.54e-30 108