Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0991 ATGGGGATTTCACCCATCCTCAGAGAGTTACCTGATCAACTGGGAATAACAATGGAGGATCCAGGTTATCTTCATGATGAGTGGCATCATCATCATCACTTGAACGCTAATTATGAGGATACAACCTCAATACCCATAGCTGCTGCAGCTTTTAGAGAGACCTTATTACAGCAACACTCTTCATTCTGTAATAATAATATGATGAACAGCCCAAACTTCAATCCCAAAACCAGTAGTTGCATGCAAACTGCTTCCTTTAATGAAGAAAGACCCACAAAGCAGATCAAAACCTGCAGCAACATTACTACTACTTCATGTTGGAGTCCCAATAATAATAATAATAATACTCATGAGAGTCCAGAGCATCACCAGACATCATCAGACCAGCTTCTGCAATTTTCTTCTTCGTGTCCAACCAACCTTGTTTCCTTTGTGAACCAGAACTACATAAATCAGATGGGATTAATGGGGAAGATCACCAGTAATGATAAGAATGAGACAGTATTATTGTCTCCAAAAGATCATCATGTTTTGATGTGTTCTCAAGAATTCTTGGGGAATCCGAACTATGGGTTCATGAAGACGACGACAAGCCAATTAGATCAGGCCAGGAAGATTATTGGGACCACTAGTCCTAATAATAATAATAATAGAGTATCTCAACCAGTACAGGACCACATCATTGCTGAAAGGAAACGAAGAGAGAAGCTTAGCCAGAGGTTCATTGCTTTGTCTGCCCTTGTTCCTGGTCTTAAGAAGATGGACAAAGCTTCTGTGCTTGGAGATGCTATAAAGTACATGAAGCAACTGCAAGAGAAAGTGAGGGTTCTTGAGGAGGAACAGACAAAGGTAAAAACAGTAGAATCTGTGGTGATTGTGAGGAAATCTCAGTTTATTCCTTCTGATATTGCGGCAGAAGCTTCAGACTCTTCTTCAGATTCTGGTGGAGGAGGAGGATCATCGTCCTTCGACGAGACAGTTCTCCCAGAAATTGAAGCAAGGTTCTGTGAGAGAAATGTGCTCATAAGAATTCACTGTGAGAAAATCAAAGGAGTTATTGAAAAAACAATGAGTGTGATGGAGGATCTCCATCTAACAGTCACCAATAGTAGTTCCTTGACTTTTGGCAGTGCTGCTCTTGATATCACAATTATTGCTCAGATGGATTCAGAATTTTGCATGACACTGGAGGATCTCGTGGGAAACCTACGCTCATCCTTTAAATCTTTCATGTGA 1236 0.4061 MGISPILRELPDQLGITMEDPGYLHDEWHHHHHLNANYEDTTSIPIAAAAFRETLLQQHSSFCNNNMMNSPNFNPKTSSCMQTASFNEERPTKQIKTCSNITTTSCWSPNNNNNNTHESPEHHQTSSDQLLQFSSSCPTNLVSFVNQNYINQMGLMGKITSNDKNETVLLSPKDHHVLMCSQEFLGNPNYGFMKTTTSQLDQARKIIGTTSPNNNNNRVSQPVQDHIIAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKYMKQLQEKVRVLEEEQTKVKTVESVVIVRKSQFIPSDIAAEASDSSSDSGGGGGSSSFDETVLPEIEARFCERNVLIRIHCEKIKGVIEKTMSVMEDLHLTVTNSSSLTFGSAALDITIIAQMDSEFCMTLEDLVGNLRSSFKSFM 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0991 411 MobiDBLite consensus disorder prediction 304 323 - -
Lele35g0991 411 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 226 284 IPR036638 GO:0046983
Lele35g0991 411 Pfam Helix-loop-helix DNA-binding domain 225 271 IPR011598 GO:0046983
Lele35g0991 411 CDD bHLH_AtNAI1_like 224 296 - -
Lele35g0991 411 Coils Coil 260 287 - -
Lele35g0991 411 MobiDBLite consensus disorder prediction 109 130 - -
Lele35g0991 411 Gene3D - 220 291 IPR036638 GO:0046983
Lele35g0991 411 MobiDBLite consensus disorder prediction 304 321 - -
Lele35g0991 411 SMART finulus 227 276 IPR011598 GO:0046983
Lele35g0991 411 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 221 270 IPR011598 GO:0046983
Lele35g0991 411 PANTHER BHLH TRANSCRIPTION FACTOR 56 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0991 Lele-ChrLele35 15787882 15791305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0991 213 411 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 54.369 2.52e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele35g0991 HLH 3.6e-10 No_clan