Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0988 ATGTTCGCTGGAGATTTTTCCCGGCTATGTCCCTCACCCATGATTTTGTTTTCTCTGTTTTTTCTCTGCCTGGCTCGTTCGTCCCTGGCGGATGAGTTTCAAATGCTCATGAAGTTCAAGTCCTCTGTTCAAACTTCAAATGCCGATGATGTTTTTGGTTCCTGGACGGAAGCCCATTCTCCCTGCAACTTCACTGGGATTCTATGTAATTCCAAAGGTTTCGTTTCAGAAATCAATCTCGACGGAAGAAATCTTGGCGGTACTATTCGGTTTGATTCACTGTGCGGGCTTCAGTCGTTAGAGACAGTATCTCTAGGGTCGAACTCCTTTCTCGGAAGCATCAGTGAGGAGCTGAGGAAGTGCAGTAATTTGAAGTATTTGAATTTGGGCGGGAATTCATTTTCTGGGGTAATGCCTGAGTTCTCTAATTTGATCAAGCTTACCTACTTGAACTTGAATGCCAGTGGAATTTCTGGGGAATTTCCATGGAAATCATTGGAAAATCTAACTAGTCTTGGGTACTTAAGCCTTGGAGATAACATACTCGAAAAAAGTCCTTTTCCTGTGGAAGTGTTAAAGCTTGAGAAATTGTATTGGCTTTACCTCACAAATTGCAGCATTACTGGGAAAATTCCATTAGGTATTGGGAATCTGACTCATCTTGAGGATCTTGAGCTTGCTGATAATCTTTTGACAGGTGAAATCCCAGGTGATATTGGAAAGCTTCAGAAGCTGAGACAACTTGAGGTATATGATAACTACTTGGTTGGGAAAATCCCAGTAGGATTTGGTAATCTTACAAATCTTTTCTACTTGGATGTTTCTAATAATCAGCTTGAAGGTGATATTTCTGAGCTACGGTTCTTGACAAACTTGGCTTCTCTTCAGCTTTTTCAGAACCAATTCTCTGGAGGAATTCCAAATGAGTTCGGAGATTTCAAAAGCCTTGTTGAATTTTCTCTTTATGCAAATAATTTCACTGGTCATCTACCTCAAAAGCTTGGCTCCTGGATTGGCTTACAATATATTGATGTTTCTGATAACTCTCTTTCTGGTACTATTCCACCTGATATGTGCAAGAACAACAACATGACTGAGCTAGCTATGCTAAACAATAGCTTCACTGGACGTATACCAGAAACATATGCGAATTGTTCGGCTATGGTTCGTTTTCTCGTTAACAGAAACTCGCTTTCTGGTCGTGTTCCTTCTGGTTTATGGGGCCTGCCAAATATAGAAATAATTGATCTTTCAATGAATCAGTTTGAAGGTTCAGTGGCATCTGATATTGCTGAAGCAAAATCTCTTGCACAACTATTTTTATCTGACAATAAGTTCTCAGGTGAACTACCCTCAGGAATCTCAGAAGCTTCATCATTGGTATCAATTAAGCTGAGTTCAAATCAATTCTCTGGTAAAATTCCTGAAACTATAGGCAACTTGAAGAAATTGGGTAGTCTAAAGTTGGATGGAAACAATTTTTCTGGCTCTATACCAGAGTCTTTAAGTTCTTGTATTTCTCTTAGTGAAATAAACATTGCTGGTAACTCGCTTTCGGGGGAAATACCTACGAGTCTTGGCTCTCTGCCTACTCTCAATTCAGTAAACTTGTCATCCAATAGACTTTCTGGCGAAATTCCATTGAGCTTGTCATTTCTTAAACTGAGTCTTCTTGATTTATCAAACAACAATTTTTTTGGTCCAGTACCAGATTCACTCTCTATTCCAGCATTCATAGATGGGTTAAAGGGAAATCCTGGCTTATGCAGTGAGACTTTGGAAAATTTTAGGCCATGTTCATTGGTTCACACTGGCTCGAGTCGAATTAGGACCATTGTACTCTGTTTGCTTGCTGGTATAATTGTTCTGCTAGTTTCATTGGCATGTATATTCTTCCTGAAACTAAAGCAGGACAAGTTTGAGAAGAAGCCTTTGAAGACGAATTCCTGGGATTTGAAGCAATACCATGTGATAAACTTCAATGAAAACGAAATCATTGAAGGGATCAAGGCTGAGAATCTGATTGGTAAAGGAGGATCCGGGAATGTTTACAAGGTTGCTCTCAAATGTGGCAAAGAATTGGCAGTCAAACACATATGGACTTCGAATCTGGGCGTTGAACCAGGAAGTGGCCGGAGCAGTTCAGCGATGCTGAAAAGAAGTTGCCGGTCCACGGAGTACGATGCAGAGGTGGCCACACTAAGCTCCATAAGGCATGTCAATGTGGTGAAGCTCTTCTGTAGCATCACAAGTGAAGATAGTAGCCTTCTTGTTTATGAGTTTTTACCAAATGGGAGCTTGTGGGATAAGCTGCACAATTGCCAGAAAACTGCCATGGATTGGGAAGTTAGGTATGAAATTGCATTGGGAGCTGCAAGAGGATTGGAGTATCTACATCATGGGTGTGATAGGCCAGTTATACATAGAGATGTGAAATCAAGTAACATATTGATTGATAAAGAATGGAAGCCAAGGATCGCTGACTTTGGGCTTGCCAAGATTGTGCAAAGAGGAGCTGGCAATTGGACAAATGTTATTGCTGGAACACTTGGATACATGGCTCCAGAGTATGCGTATACATGTAAGGTGACTGAGAAGAGCGATGTTTATAGCTTTGGAGTAGTTCTAATGGAGTTAGTGACGGGGAAGAAGCCGAATGAATCAGAGTTCGGAGAGAACAAGGACATAGTCAACTGGGTATGTGGCAACAAGAGGACCACCAAAGAAGACATGGCTGAAGTTGTGGACCCCACAATTCCAAAGCATTTCAAAGATGATGCCATGAAGGTTCTGAGAATTGCAACACTCTGCACTGTGAAGGTTCCATACTCGAGACCTTCCATGAGAATGGTGGTTCAAATGCTGGAAGAAGCAGCACCATGTTCTCTCACTGATGTTGTGACTAAAGATGGTTAA 2916 0.4119 MFAGDFSRLCPSPMILFSLFFLCLARSSLADEFQMLMKFKSSVQTSNADDVFGSWTEAHSPCNFTGILCNSKGFVSEINLDGRNLGGTIRFDSLCGLQSLETVSLGSNSFLGSISEELRKCSNLKYLNLGGNSFSGVMPEFSNLIKLTYLNLNASGISGEFPWKSLENLTSLGYLSLGDNILEKSPFPVEVLKLEKLYWLYLTNCSITGKIPLGIGNLTHLEDLELADNLLTGEIPGDIGKLQKLRQLEVYDNYLVGKIPVGFGNLTNLFYLDVSNNQLEGDISELRFLTNLASLQLFQNQFSGGIPNEFGDFKSLVEFSLYANNFTGHLPQKLGSWIGLQYIDVSDNSLSGTIPPDMCKNNNMTELAMLNNSFTGRIPETYANCSAMVRFLVNRNSLSGRVPSGLWGLPNIEIIDLSMNQFEGSVASDIAEAKSLAQLFLSDNKFSGELPSGISEASSLVSIKLSSNQFSGKIPETIGNLKKLGSLKLDGNNFSGSIPESLSSCISLSEINIAGNSLSGEIPTSLGSLPTLNSVNLSSNRLSGEIPLSLSFLKLSLLDLSNNNFFGPVPDSLSIPAFIDGLKGNPGLCSETLENFRPCSLVHTGSSRIRTIVLCLLAGIIVLLVSLACIFFLKLKQDKFEKKPLKTNSWDLKQYHVINFNENEIIEGIKAENLIGKGGSGNVYKVALKCGKELAVKHIWTSNLGVEPGSGRSSSAMLKRSCRSTEYDAEVATLSSIRHVNVVKLFCSITSEDSSLLVYEFLPNGSLWDKLHNCQKTAMDWEVRYEIALGAARGLEYLHHGCDRPVIHRDVKSSNILIDKEWKPRIADFGLAKIVQRGAGNWTNVIAGTLGYMAPEYAYTCKVTEKSDVYSFGVVLMELVTGKKPNESEFGENKDIVNWVCGNKRTTKEDMAEVVDPTIPKHFKDDAMKVLRIATLCTVKVPYSRPSMRMVVQMLEEAAPCSLTDVVTKDG 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0988 971 FunFam Receptor-like protein kinase HAIKU2 652 761 - -
Lele35g0988 971 Gene3D Ribonuclease Inhibitor 288 604 IPR032675 -
Lele35g0988 971 Gene3D Phosphorylase Kinase; domain 1 653 761 - -
Lele35g0988 971 Gene3D Ribonuclease Inhibitor 28 187 IPR032675 -
Lele35g0988 971 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 21 955 - -
Lele35g0988 971 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Lele35g0988 971 Pfam Protein kinase domain 672 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0988 971 SUPERFAMILY Protein kinase-like (PK-like) 661 956 IPR011009 -
Lele35g0988 971 ProSiteProfiles Leucine-rich repeat profile. 268 290 IPR001611 GO:0005515
Lele35g0988 971 Gene3D Ribonuclease Inhibitor 188 287 IPR032675 -
Lele35g0988 971 SUPERFAMILY L domain-like 350 573 - -
Lele35g0988 971 FunFam Inactive leucine-rich repeat receptor-like protein kinase 380 475 - -
Lele35g0988 971 SUPERFAMILY L domain-like 60 259 - -
Lele35g0988 971 ProSitePatterns Protein kinases ATP-binding region signature. 675 697 IPR017441 GO:0005524
Lele35g0988 971 SUPERFAMILY L domain-like 192 424 - -
Lele35g0988 971 SMART serkin_6 669 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0988 971 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 476 597 - -
Lele35g0988 971 FunFam Receptor-like protein kinase 7 114 363 - -
Lele35g0988 971 ProSiteProfiles Protein kinase domain profile. 669 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0988 971 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 762 970 - -
Lele35g0988 971 Gene3D Transferase(Phosphotransferase) domain 1 762 965 - -
Lele35g0988 971 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0988 Lele-ChrLele35 15762017 15765438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0988 12 967 Receptor kinase-like Gene Family AT1G09970 56.802 0.0 1031
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele35g0988 Pkinase 1.1e-43 CL0016