Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0986 ATGCTTCTACAGGAAGAGGGAAAGAGCAACAGAGCCCCATTGAATGAACTGACAGACCTTGAACGTGGTGATGCAGTAGTGTCCCTCATCATCTTTGAAGCCTCTTATAACATCTCATCATACGATCAGATTTCTGTAGGACTGCTAACTTTATGCTTGAAAAATCAGGTAGCAAATGTTGGATTTGGCAGGGTACTTTCACTTCCAAATTTGGTGGAAAGATTAGTTTCGACAGCACTTGATGGTTGGCTTTTTTCCTCAGCTAGTGAAAGGGTTGTTGCTAGGCTTAGAGAAAGATTATTTAGTTACCTCATAATCCAGGAGATAGCCTTTTTTGATGTTACCCGTACAGGGGAACTTATGAGCACGATATCTGAAGATACAGCAACTACCATTCTATCTCATGCGCTGGGTAGCTTATGGACTGCATTTATTGGTCTTGGCTTCATGCTTTTGACGTCATGGAATATCCCGATTTTCTTCATCATTGAATCACTTCCAGTGTTGGCTTTAGCTGTTGTGCCTGCTACTTTTATAGCTGCACGTAAATTTGGTTGGTTCCTACGTGAACTTTCTCAGAAAACTCAAGATGCAGCTGCAGCAGCTGCTTCAATAGCTGAGGAACCCTTTGGTGCCATAAGGACGGTAAGATCTTTCGCCCAAGAAGAATATGACATATCTCGCTACTCTCAGAAAGTTGATGAGGCAGTTAAGCTTGGATTTAAACAAGCTGTGAATTCCATGTCCACCGGTGATCATACTTCTTTCATTCTTTATAGTCTCACAGCTACATCACCTGCAGTGGGACCTTCTATATCTGGCCTCTCAGGATTGTATACCATAGCTATGAAAGCTGTGGGTGCAAGCAGAATGGTGTTTCACCTTCTTGATCGTGTGTCGTCAAATGCCAATGTCGGGAATATTATGCTCTTTGATAAGCAGATCAGTATTGTGAGTCAGGAGCCTGTACTTTTCAACTGCTCCATTGAGGAGAACATAGCTTATGGATTTGATGGCAAAGTTAATCCTGCTGATATAGAAAATGCAGCTGTAAGATTCAATACTTTCTTTTACGAATGCTACGGAACGTCTGATGAAGGGAAGGACAGTTCTAGTTATTGCTCACAGGCTACCAACTGTGAAGAGTGCAGAGACAGTTGTAGTAAGTTGTTTGTGATGGGGAAATTGTGGAGCGTGGCAGCCATGAACACCTTCTCAACAACATTAATGGTGTCTATTCTGCTTTTGGGGTTGATTGAAGCTAATGCTGTTGTCTTTTTATCATGGAAGATGGCAAGTGAAAAGTTCATGTCAGAAAACTTTGCAGGTAGGTATTTTATTGGGAGAGACGTGTGGCAGATGATAGAGGAAAGAGGAAACAGCGCTAGAAAAGCCGGGCGATCAGACTTGCTCTTACGTCGATACGGCTTTGAAAAGCCGTGGGTGTCTTGCAATGGAGGCGATGCCCCAGCCGAAGCCTCCCTTCAAACTTGTTCTTTAGGCCTTCAAAGATTTTCAGATATGCAACGTTTTCTTCGCCAAGTTGTCACAATCTCAGGCAAAACCCGCCGTATTTTCCACTCTCACTCTATCCCCAGCCATCTACCTCCCCACATTTCTGCTGCTTTTCGAAATCCCCCTCTTCACCCTTTTCATCCATGGAGCTCCGAGCATACCGTTTCCGGGATCTTCCGTGGGTCCCACTCTGGCGCAGTGTTCGCTCGTCACTTCATGCTCAGTTCGTCCAACTCTCTCCTCAACGGAAGGGTCGGAGGTTTTGGGCCGAAGCTTCTGACAGCTCAATTTCGTGGCAATAGCTTCGATGTCAATCGTAGCTTTCGTTACTACAGTGGTGGATGGAGATCATGGTTCAAAGGACTAACAACTAATGACGTAGTTTTTGGCTTGATTATAGCTAATGTTGTTGTTTTTTTATCATGGAGGATAGCAAGTGAAAAGTTTATGTCAGAAAACTTCACAATCTCGTTGCACAATCTCAATTGTGGACGCTTGCACACTTTGATAACCAATGCATTCAGCCACATTGACACGGAGCATATCATTGCTAACATGATTGGACTCTACTTCTTTGGGACTAGTATTGGAAGAGCTTTCGGACCTGAATATGTGCTGAAGTTGTATCTTGCTGGGGCGGTTGGTGGTTCAGTTTTTTACTTGGCCCATCAAGCCTATAAGGCATTAATGTCAAAGGGTTGGAAGCGTCTGGAGGTTTCAAAACATCAAGCATTGGGTGCTAGTGGAGCTGTGAATGCAATCATGCTACTTAATATATTCCTCTTTCCGAGGGCAACCCTTTATCTTGACTTTATAATACCAGTTCCTGCTATCTTGCTGGGCATCTATTTGATTGGGAGTGACGTGATGAAGATTATAGAGGGAGACGCTCGTATATCAGGATCTGCACATTTAGGGGGTGCTACCGTTGCAGCCATTGCTTGGGCCCAAATGCGGAAAGGAAGATTCTGA 2487 0.4395 MLLQEEGKSNRAPLNELTDLERGDAVVSLIIFEASYNISSYDQISVGLLTLCLKNQVANVGFGRVLSLPNLVERLVSTALDGWLFSSASERVVARLRERLFSYLIIQEIAFFDVTRTGELMSTISEDTATTILSHALGSLWTAFIGLGFMLLTSWNIPIFFIIESLPVLALAVVPATFIAARKFGWFLRELSQKTQDAAAAAASIAEEPFGAIRTVRSFAQEEYDISRYSQKVDEAVKLGFKQAVNSMSTGDHTSFILYSLTATSPAVGPSISGLSGLYTIAMKAVGASRMVFHLLDRVSSNANVGNIMLFDKQISIVSQEPVLFNCSIEENIAYGFDGKVNPADIENAAVRFNTFFYECYGTSDEGKDSSSYCSQATNCEECRDSCSKLFVMGKLWSVAAMNTFSTTLMVSILLLGLIEANAVVFLSWKMASEKFMSENFAGRYFIGRDVWQMIEERGNSARKAGRSDLLLRRYGFEKPWVSCNGGDAPAEASLQTCSLGLQRFSDMQRFLRQVVTISGKTRRIFHSHSIPSHLPPHISAAFRNPPLHPFHPWSSEHTVSGIFRGSHSGAVFARHFMLSSSNSLLNGRVGGFGPKLLTAQFRGNSFDVNRSFRYYSGGWRSWFKGLTTNDVVFGLIIANVVVFLSWRIASEKFMSENFTISLHNLNCGRLHTLITNAFSHIDTEHIIANMIGLYFFGTSIGRAFGPEYVLKLYLAGAVGGSVFYLAHQAYKALMSKGWKRLEVSKHQALGASGAVNAIMLLNIFLFPRATLYLDFIIPVPAILLGIYLIGSDVMKIIEGDARISGSAHLGGATVAAIAWAQMRKGRF 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0986 828 Gene3D - 629 822 IPR035952 -
Lele35g0986 828 PANTHER RHOMBOID PROTEASE 514 821 - -
Lele35g0986 828 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 74 244 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele35g0986 828 FunFam RHOMBOID-like protein 12, mitochondrial 626 827 - -
Lele35g0986 828 Pfam ABC transporter transmembrane region 76 260 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele35g0986 828 Gene3D - 307 352 IPR027417 -
Lele35g0986 828 Gene3D ABC transporter type 1, transmembrane domain 57 299 IPR036640 GO:0005524|GO:0016020
Lele35g0986 828 SUPERFAMILY Rhomboid-like 632 823 IPR035952 -
Lele35g0986 828 Pfam Rhomboid family 669 820 IPR022764 GO:0004252|GO:0016020
Lele35g0986 828 SUPERFAMILY ABC transporter transmembrane region 74 297 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0986 Lele-ChrLele35 15722563 15737134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0986 83 242 Calmodulin-binding Proteins AT2G36910 28.485 3.47e-07 52.4