Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0953 ATGAACAGGAATCTCTTGGCTTTAATAGTAGGGATTTGTGTAGGCTTTGTCTTTGGAGTGGGTGTGGCAATTGCATTTGTATGCTGCTTCTGGTGCCAAAATAAGCATACAAAGGAAAAGAGAAGCTCTGAGAAATCAGGAAACATTCCTCTTCGTATCAAGGTAGTCGATCCTGGTGTATCATTGTCAAGCTCAAATGTGGGGCAGGATTCGCCCGCATCATCTGACTGGAGTAACATGCCTCTTTGGTTGGAAGGACTTAAGAGTAAGGATGTTGGTTCTGCATGTGGAATTCCAAAGTATTCTTACAAAGATATGCAGAAGGCAACTTCTGATTTCACAACCATCATAGGTCGTGGAGCATTTGGTTCAGTTTACAAAGCTCAGATGCTCACTGGGGAAACAGTTGCTGTTAAAGTTCTTGGTAATAATTCAAGACATGGAGAGAAGGAGTTTTTGACCGAGGTCTTGTTACTTGGAAGATTACACCACAAACGCCTTGTGGATTTGGTGGGATATACTGCAGAAAGAGGACAGCATATGCTCCTTTTTGCTTACATGAGTAATGGCAACCTCGCCTCTCACTTATATGGCAAAACTCAGGAGCCATTAAACTGGGATGCAAGATTTCAGATAGCACTAGATGTTGCGAGGGGAATGGAATATCTACATTATGGGGTACATAGTATACTTGCTTCTCCCCCTGTTGTGCACCGTGACATTAAATCTTCCAACATACTGCTGGACCAGTTTATGAGAGCCAAGGTAACGGACTTTGGGCTTTCTAGACCAGAGATGATTAAACGTCGTTCATCTAATGTCAAAGGAACTTTTGGCTATCTGGATCCAGAATACATGTCTACAAAAACTTTTACCAAGAAAAGTGATGTTTATAGTTTTGGTGTGCTACTCTTTGAATTGATTACTGGCAGGAATCCACAGCAGGGCCTGATGGAATATGTGAAACTAGCTGCCATGGAAGCCGAGAGTAAGGTTGGATGGGAAGAAATTGTGGATTCACAACTTAATGGAAAATATGACGTGCATAGGCTTAATGATATGGCTGCTCTTGCTTTGAAATGTGTCAATGAAGCATCCAGAGATCGACCTTCCATGAGAGACATTGTTGGATCATTATCTCAGCTCTGTAAGAAGAAGCATTATGGAAATGATACTATGAAGTCTCTTTCTGCAGTAAGTGAAGTTTCCATTGAATTGGTTTAA 1224 0.415 MNRNLLALIVGICVGFVFGVGVAIAFVCCFWCQNKHTKEKRSSEKSGNIPLRIKVVDPGVSLSSSNVGQDSPASSDWSNMPLWLEGLKSKDVGSACGIPKYSYKDMQKATSDFTTIIGRGAFGSVYKAQMLTGETVAVKVLGNNSRHGEKEFLTEVLLLGRLHHKRLVDLVGYTAERGQHMLLFAYMSNGNLASHLYGKTQEPLNWDARFQIALDVARGMEYLHYGVHSILASPPVVHRDIKSSNILLDQFMRAKVTDFGLSRPEMIKRRSSNVKGTFGYLDPEYMSTKTFTKKSDVYSFGVLLFELITGRNPQQGLMEYVKLAAMEAESKVGWEEIVDSQLNGKYDVHRLNDMAALALKCVNEASRDRPSMRDIVGSLSQLCKKKHYGNDTMKSLSAVSEVSIELV 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0953 407 Gene3D Transferase(Phosphotransferase) domain 1 187 402 - -
Lele35g0953 407 PANTHER OS01G0750732 PROTEIN 19 389 - -
Lele35g0953 407 Gene3D Phosphorylase Kinase; domain 1 95 186 - -
Lele35g0953 407 Pfam Protein tyrosine and serine/threonine kinase 114 378 IPR001245 GO:0004672|GO:0006468
Lele35g0953 407 ProSiteProfiles Protein kinase domain profile. 111 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0953 407 FunFam calcium/calmodulin-regulated receptor-like kinase 1 187 401 - -
Lele35g0953 407 ProSitePatterns Protein kinases ATP-binding region signature. 117 139 IPR017441 GO:0005524
Lele35g0953 407 SUPERFAMILY Protein kinase-like (PK-like) 97 379 IPR011009 -
Lele35g0953 407 SMART serkin_6 111 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0953 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0953 Lele-ChrLele35 15304785 15309207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0953 93 389 Receptor kinase-like Gene Family AT3G19300 39.735 9.04e-73 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lele35g0953 PK_Tyr_Ser-Thr 3.5e-50 CL0016