Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0888 ATGTTTAAATGTAGAGGTTATATTTCTCTAGAATATGCAACAGAAAGACTCTATTCAGAGAAATCTGATGTCTTTAGCTTTAGTGTTTTGCTACTTGAAGTTATTAGTGGAAGAAAAAACATTAGCTTTTCTGAAGATGCAGAGTCATTGACACTTTTAGGATCTGCATGGAAGCTATGGATCAATGGCAGCATTATCCCTCTAATAGATCTACAAATATATGATTCAAGCTTTCACAAGGATGTATTGAGGTGCATACATATAGGTCTTCTGTGTGTGCAAGAACTTGCAAAAGATAGGCCCACCATGGCGTCTATAATGTTAATGCTTCAAAGAGAGATTATAGATATTCCTCCCCCAAGCCAACCTGCATTCACCCTCAGACAGAAAATGTCCCATCCAATAGAGAAAACTCCAAAAAATGATGAATTATATTCCATATATAAAGTAACTATCTCAAATTTTGAGGGGACATAG 477 0.3564 MFKCRGYISLEYATERLYSEKSDVFSFSVLLLEVISGRKNISFSEDAESLTLLGSAWKLWINGSIIPLIDLQIYDSSFHKDVLRCIHIGLLCVQELAKDRPTMASIMLMLQREIIDIPPPSQPAFTLRQKMSHPIEKTPKNDELYSIYKVTISNFEGT 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0888 158 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 134 - -
Lele35g0888 158 Pfam Protein tyrosine and serine/threonine kinase 7 57 IPR001245 GO:0004672|GO:0006468
Lele35g0888 158 SUPERFAMILY Protein kinase-like (PK-like) 5 135 IPR011009 -
Lele35g0888 158 Gene3D Transferase(Phosphotransferase) domain 1 2 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0888 Lele-ChrLele35 8450403 8450996 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0888 6 153 Receptor kinase-like Gene Family AT4G23150 45.946 1.25e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele35g0888 PK_Tyr_Ser-Thr 1.1e-05 CL0016