Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0887 ATGTCCAAATCCTCTGTTGTTTGGGTAGCTAACAGAAACAACCCACGAACTGATTCATCAGGGATTCTCACAATATCAGAGAATGGCAATCTTGTCGTTTTGAATGGGCAAAAACAAGTTGTTTGGTCAACAAATGTATCAATCACATCAAATTCCAGTGCTCAGCTCTTAGATTCTGGCAACCTCGTCCTTGTAGATAGAACAACTGGATTATTCATGTGGCAAAGTTTCCAGCATCCTAGTGATACATTATTACAGGACATGAGACTCAGTACGATGCGAAAAACAGTGTTCATATGGAAAGAAAATCATCCTTACTGGCGCAGTGGTCCTTGGAATGGCACACACTTTCTTGGGCTACCTGAGAGTTTATATAAGTTCCTGAATGGGTTTCAGATTAAAGGAGAGGAAGGGAGTTTTGAGCTATATTTTCATTACACAGACAAATCATTATTGCTAACTCTTAGGCTAGATCCTCAAGGTAAAATACAAAAGCAACGTTGGAATCCCCAGACAAATATATGGGAACTTGAGTGGACAAGCGGTATTACTGAGTGTGATGTTTATGGCATATGTGGCCCATTTGGCATCTGCAATTCGCTGAGCTCACCAATCTGCAGCTGCTTGAGAGGGTTTGAACCAAAAAACAAAGAGGAATGGGAAACGAAGAACTGGACCAGTGGATGTGTGAGAAGGGAAGCACTTCAGTGCGAGAAAAACAAAAATGGTAGTAAGGCAGATGGGTTTACAAAGTTGGAGAGGGTAAAACCACCAGATCATGCAGATTTGTTACCTTTCAACTTTAAAGGCACTGCAGATTGTCAAACTCCATGCCTGAAGAATTGCTCTTGTGTAGCTTATGCATTTAACACTGGCCTTGGCTGTATGCTTTCGAATGCAGATTTACTTGACCTGGAGAGAATCTCAGATGGAGGAGTTTATCTTTACATACGTTTAGCCGACTCAGAACTAGGTACAGCTAGGAGCATGACAACACCTATTGTGATATCAGTTCTAACAGGAACAATTCTCATCACTGCTGCTGGATATTTCTTATGGAAGAAAATGACAAAGCGAAAAGGTGAAATGGAGATGCAAATTGACGACAAAAGAAGGAATACAAACCTTAAGCAAATCAAAATTCATGAGCTATCATTGTTTGATTATAGAAGGTTGGCAACTGCAACAAACAACTTTGACTCAGAGAATAAACTTGGACAGGGTGGTTTTGGTCCAGGTAAATTGGAAGATGGAAAGGAAATAGCAGTGAAAAGACTATCAAGATCATCAAGACAGGGTATGGAAGAATTTATCAATGAAGTGGAGTTGATTTCTAAGCTTCAACACCGAAACCTAGTTAGACTTCTTGGCTGTTGCATCGAAAGGGAAGAAGAGATATTGGTTTATGAATACATGCCAAACAAAAGTTTGGATGCATATATCTTTGATCCTTTGCAACGGCAAACTTTAGATTGGGGAAAGCGCTTCAACATAATTGAGGGAATTGCAAGAGGATTGCTTTATCTTCATAGAGATTCAAGATTAAAAATTATACATAGAGATTTGAAGGCAAGTAACATATTATTGGATAAAGAGATGAATCCAAAGATATCAGATTTTGGGATGGCTAAACTTTTTGGAGGTAGTGAAGATCAAGCAAATACAGAAAGAATTGTTGGAACATAG 1686 0.3915 MSKSSVVWVANRNNPRTDSSGILTISENGNLVVLNGQKQVVWSTNVSITSNSSAQLLDSGNLVLVDRTTGLFMWQSFQHPSDTLLQDMRLSTMRKTVFIWKENHPYWRSGPWNGTHFLGLPESLYKFLNGFQIKGEEGSFELYFHYTDKSLLLTLRLDPQGKIQKQRWNPQTNIWELEWTSGITECDVYGICGPFGICNSLSSPICSCLRGFEPKNKEEWETKNWTSGCVRREALQCEKNKNGSKADGFTKLERVKPPDHADLLPFNFKGTADCQTPCLKNCSCVAYAFNTGLGCMLSNADLLDLERISDGGVYLYIRLADSELGTARSMTTPIVISVLTGTILITAAGYFLWKKMTKRKGEMEMQIDDKRRNTNLKQIKIHELSLFDYRRLATATNNFDSENKLGQGGFGPGKLEDGKEIAVKRLSRSSRQGMEEFINEVELISKLQHRNLVRLLGCCIEREEEILVYEYMPNKSLDAYIFDPLQRQTLDWGKRFNIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDKEMNPKISDFGMAKLFGGSEDQANTERIVGT 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0887 561 Gene3D Transferase(Phosphotransferase) domain 1 472 561 - -
Lele35g0887 561 Pfam S-locus glycoprotein domain 107 216 IPR000858 GO:0048544
Lele35g0887 561 Pfam Protein kinase domain 400 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0887 561 CDD EGF_CA 183 216 - -
Lele35g0887 561 ProSiteProfiles PAN/Apple domain profile. 237 320 IPR003609 -
Lele35g0887 561 SMART blect_4 1 80 IPR001480 -
Lele35g0887 561 SUPERFAMILY alpha-D-mannose-specific plant lectins 4 113 IPR036426 -
Lele35g0887 561 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 472 561 - -
Lele35g0887 561 SUPERFAMILY Protein kinase-like (PK-like) 374 561 IPR011009 -
Lele35g0887 561 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 5 551 - -
Lele35g0887 561 CDD PAN_AP_plant 235 320 - -
Lele35g0887 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
Lele35g0887 561 CDD B_lectin 6 80 IPR001480 -
Lele35g0887 561 Gene3D - 2 117 - -
Lele35g0887 561 SMART serkin_6 399 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0887 561 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 363 471 - -
Lele35g0887 561 Gene3D Phosphorylase Kinase; domain 1 372 471 - -
Lele35g0887 561 ProSiteProfiles Bulb-type lectin domain profile. 1 77 IPR001480 -
Lele35g0887 561 Pfam D-mannose binding lectin 6 96 IPR001480 -
Lele35g0887 561 SMART ntp_6 244 319 IPR003609 -
Lele35g0887 561 Pfam PAN-like domain 244 305 IPR003609 -
Lele35g0887 561 ProSiteProfiles Protein kinase domain profile. 399 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0887 Lele-ChrLele35 8447445 8450338 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0887 325 561 Receptor kinase-like Gene Family AT4G23190 51.667 1.23e-75 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele35g0887 Pkinase 5.4e-31 CL0016