Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0863 ATGAAGAAGTGTGAGCTCTGCAACTCTCCTGCAAAACTGTTCTGTGAATCAGACCAAGCTGATCTCTGTTGGGTATGTGATTCCAAGGTTCACTCTGCTAATTTCATTGTAATAAAACATTCCAGAATCCTTCTCTGCCATCTCTGTCAATCTTTTACTCCTTGGCGTGGTTCTGGACCCAAGTTGGTTCCCACCATATCTGTTTGTAATGATTGTGCCACCACCAAGAATGACGGGTTCCGACAACAGAACGATGACGAAGATGGTGGCGAAGATGAAGAAGAAAATGGCGACGATGAAGAAGATGACGTCAGAGAAGGAGAAGATGATGATCAAGAAGATCAAGTGGTTCCATGGAAATGTGCGCCAACACCTCCAGTTTCAAGTTCTTCATACAGTTCAAACAATTCTTCGAGGTTCTCAGATTAG 429 0.4359 MKKCELCNSPAKLFCESDQADLCWVCDSKVHSANFIVIKHSRILLCHLCQSFTPWRGSGPKLVPTISVCNDCATTKNDGFRQQNDDEDGGEDEEENGDDEEDDVREGEDDDQEDQVVPWKCAPTPPVSSSSYSSNNSSRFSD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0863 142 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 136 - -
Lele35g0863 142 MobiDBLite consensus disorder prediction 85 113 - -
Lele35g0863 142 MobiDBLite consensus disorder prediction 74 142 - -
Lele35g0863 142 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Lele35g0863 142 Gene3D Classic Zinc Finger 1 35 - -
Lele35g0863 142 MobiDBLite consensus disorder prediction 124 142 - -
Lele35g0863 142 CDD Bbox1_BBX-like 3 45 - -
Lele35g0863 142 SMART bboxneu5 1 45 IPR000315 GO:0008270
Lele35g0863 142 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0863 Lele-ChrLele35 7561414 7561842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0863 2 110 C2C2-CO-like Transcription Factor Family AT4G27310 52.252 9.61e-37 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele35g0863 zf-B_box 6.6e-09 No_clan