Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0856 ATGTCCCCCCTGCTTGCCCAAAGGCTCTGTGACTCGAGGACGTCCACAGTTGGAAAAGTAGGTGGTTGTTGTAAGCCGATTTATCTTGCAAGAGTGTTCTATACGAATATGGGCTTGCATGTTCGAATCTTTGTCATGTTGATGATAGCTTTTACGGGAACCTTTTGTACTGGAGATACTGACTTGCTTGACGTTGCAGCAATCAATAGTTTATATGTTGCTCTGGGCTCACCGCCTCTTCAAGGTTGGAAAGCCACTGGGGGAGATCCATGCGCAGAACTGTGGCAAGGCGTGGCTTGTGTCTTCTCCAACATAACTCAACTAACTCTCAGTGGCATGAATTTGGGTGGAGAGCTGGGCAGTAATTTAAATTTTCCTTCCATCATTACAATAGATCTTAGCAATAACCACATTGGAGGGCCTATTCCATTCACGCTACCCCCTACTCTGAGGAACTTGTCTCTTTCAAGTAATCAGTTAAATGGAAGTATTCCAGATGCTCTATCCTCTCTAACACAATTGTCAGATCTGTCATTAAGTAATAACCTTCTAGATGGACAAATCCCTGATGTGTTTCAGCAGCTTACTGGCCTGATAAACATAGACCTGTCTGCTAACAACTTGAGTGGTCAGCTACCCCCCTCAATGGGACAATTGTCATTGCTTTCAACATTACACTTGCAGAACAATGAACTTTCTGGGTTTCTTAATGTTTTGCAAGACCTTCCTATTCAGGATTTGAATATAGAGAACAATTTATTCTTTGGGCCAATTCCTCCACCATTGTTGAGTATCCCAAATCTCAGAAAAGATGGAAATCCATTTAATACTACTGTCATCCCATCACCTCCAGCTGCAGCCCCAGCTCCCGTAGCTATGGCTCCAGCCCTTGCCGAAGCGCCTTGGAATGGGGCAAATACTCCATTTACCTTGGTTGCACCAATACCTGCAAGTGCTAGGAAGTCTTTTATATCTAAGAATGTTATTTGGATTGCCATTGCTGGGTTTTTTGTATTTATTGCCCTTGGAGTTTTTCTTTTTATGTTGTGGTGCTGTAAGAGAAGGCCAGAAAACAAAAATGCTAAAAAGTGTGATGTGGGTTTGGACGCAATATCATTACATGAACATCAATACAATGACTCTTTGGAGAAAGCTTCTGGGAAATCAATAAGATCACTTGGATATGGAGAAAAAAATAGAAGAACAAATATGATTCCAAATGTTCAGGATGAACAGGAAATACATGTGAACAGATTATCAGCAGGTTCCAAACTTTCAACATTGCAGCCACCACCATCTCTTCCAATCAGTCTTGGTGAAAAGGACTTAACCAAACCAGCCATACCTACCAAAGTTACTGAAAGACAAGTTATGACAAGTTCCTTGCAAGTTTATACTATTGCATCACTTCAGCAGTATACAAATAGTTTTTCCCAAGAAAATTATATTGGTGAAGGCACACTAGGTGTCGTTTATCGGGGTGAACTCCCTGATGGAAAGCAACTGGCTGTGAGGAAACTGAATGCCACTGCTTCTATTGGACATGAACAGTTTCTTCAATTAGTGTCCAATATTTCCAAAATTCAGCATGCTAATATCGTGAAGCTTATGGGCTACTGTGCTGAGAATGGTCAACAATTGCTTGTATATGATTATTTCAGCAATGGAACTCTTCATGATGCACTGCATGAAGATAATGAACTCCATGCTAAACTGTCATGGAATGCACGCATTCGAGTGGCACTTGGAGCTGCAAGAGCTTTAGAGTATCTGCATGAGAACTTCCAGCCACCTATTGTGCATCGAAGTTTAAAATCAGCTAATATTCTCTTGAATATTGAGCTTGAAGTATGTGTCTCTGATTGTGGATTTGATCCTTTACTATCTTCTGGATCTGCTGGTCAGTTGTCAGGACGCCTCCTTACAGCTAATGGTTATGCTGCGCCAGAATTTGAGTCAGGGAGTTTTACAAAACAGAGTGATGTCTTTAGTTTTGGAGTTGTAATGCTAGAACTCCTCACTGGACGAAAATCATGTGACAGGTCACGATCTCGGGGTGAGCAATTTCTGGTCAGATGGGCAGTTCCTCAACTGCATGACATTGATGCTTTAACAAAAATGGTTGACCCTTCCTTAAATGGAGCTTATTCTATGAAGTCCTTGTCACGTTTTGCAGACATCATTTCTTCATGTCTACAGCGTGAACCAGAGTTCCGACCAGCAATGGCGGAAGTTGTGCATGATCTCTTACGAATGATCTAG 2262 0.4173 MSPLLAQRLCDSRTSTVGKVGGCCKPIYLARVFYTNMGLHVRIFVMLMIAFTGTFCTGDTDLLDVAAINSLYVALGSPPLQGWKATGGDPCAELWQGVACVFSNITQLTLSGMNLGGELGSNLNFPSIITIDLSNNHIGGPIPFTLPPTLRNLSLSSNQLNGSIPDALSSLTQLSDLSLSNNLLDGQIPDVFQQLTGLINIDLSANNLSGQLPPSMGQLSLLSTLHLQNNELSGFLNVLQDLPIQDLNIENNLFFGPIPPPLLSIPNLRKDGNPFNTTVIPSPPAAAPAPVAMAPALAEAPWNGANTPFTLVAPIPASARKSFISKNVIWIAIAGFFVFIALGVFLFMLWCCKRRPENKNAKKCDVGLDAISLHEHQYNDSLEKASGKSIRSLGYGEKNRRTNMIPNVQDEQEIHVNRLSAGSKLSTLQPPPSLPISLGEKDLTKPAIPTKVTERQVMTSSLQVYTIASLQQYTNSFSQENYIGEGTLGVVYRGELPDGKQLAVRKLNATASIGHEQFLQLVSNISKIQHANIVKLMGYCAENGQQLLVYDYFSNGTLHDALHEDNELHAKLSWNARIRVALGAARALEYLHENFQPPIVHRSLKSANILLNIELEVCVSDCGFDPLLSSGSAGQLSGRLLTANGYAAPEFESGSFTKQSDVFSFGVVMLELLTGRKSCDRSRSRGEQFLVRWAVPQLHDIDALTKMVDPSLNGAYSMKSLSRFADIISSCLQREPEFRPAMAEVVHDLLRMI 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0856 753 Pfam Protein tyrosine and serine/threonine kinase 480 749 IPR001245 GO:0004672|GO:0006468
Lele35g0856 753 SUPERFAMILY Protein kinase-like (PK-like) 455 749 IPR011009 -
Lele35g0856 753 Gene3D Transferase(Phosphotransferase) domain 1 553 752 - -
Lele35g0856 753 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 553 753 - -
Lele35g0856 753 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 443 552 - -
Lele35g0856 753 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 61 286 - -
Lele35g0856 753 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 46 751 - -
Lele35g0856 753 Pfam Leucine rich repeat 148 208 IPR001611 GO:0005515
Lele35g0856 753 Gene3D Phosphorylase Kinase; domain 1 440 552 - -
Lele35g0856 753 SUPERFAMILY L domain-like 64 269 - -
Lele35g0856 753 Gene3D Ribonuclease Inhibitor 64 281 IPR032675 -
Lele35g0856 753 ProSiteProfiles Protein kinase domain profile. 477 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0856 Lele-ChrLele35 7383778 7391634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0856 64 753 Strubbelig Receptor Gene Family AT4G03390 53.108 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele35g0856 PK_Tyr_Ser-Thr 7.7e-39 CL0016