Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0853 ATGGAGTATGGACAAAAGTGGTTCGGAATGCCTTTGGTGCTTATACGCCTTGTGCAATTGGTCATGGGACTATCGGTTCTAAATTTAGATGGGCAGACTGGTATTGCCCCATTTGAGATGGTTTCACTCATTGTTGAGGCTCTTGCTTGGTGCTCTATGCTGGTTCTCATTCTTCTTGAAACTAGAGTCTATGTCTATGAATTCCGATGGTTTGTCAGATTTGCTGTGATTTATACTATAGTGGGGGATGCTGTTATGTTCAATCTCATACTTTCCGCGAAGGAATTCTACACTAGATCAATGATATATTTATACACAAGTGAGGTTGTCATACAGGCTTTGTTTGGAATACTGTTGCTTGTGTACATTCCTACTTTAGATCCTTATTCTGGATATGTCCCCATCCGAGGTGAACTGGTCACTGATATTGCATATGAAGAACTCCCAGGAGGAGAACAAATATGTCCTGAGAGGCAGGGCAACATATTTTCAAGAATAACTTTCGCTTGGATGAATCCTATAATGAAGCTGGGATATGAAAGACCACTTACTGAGAAAGACGTATGGAAATTGGATACTTGGGATCGGACTGTGACTTTGAACAACAAGTTCCAAATACGTTGGAATGTGGAATCTCAAAAGTCCAAACCCTGGCTTTTAAGAGCATTAAATAGTAGCCTTGGAGGAAGGTTTTGGTGGGGAGGCTTTTGGAAGATTGGCAATGACGTTTCCCAATTTCTGGGGCCTCTTATATTGAACCAGCTTCTACAGTCTATGCAAAGAGGTGACCCGGCGTGGATTGGCTATGTGTACGCCTTCTCAATATTTGTTGGAGTGGTTTTCGGAGTTTTATGTGAAGCTCAATATTTTCAGAATGTCATGCGAGTTGGTTTTTGGCTAAGATCAACATTGGTGGCAGCTGTGTTTCGCAAATCTTTAAGACTTACTCATGAAGCCCGAAAGCAATTTGCGTCTGGGAAAATAACCAATTTGATGACTACTGACGCTGAGGCACTTCAGCAAATATGTCAGTCACTTCATACTTTGTGGTCTGCTCCATTTCGCATCACTGTTGCAATGGTTCTTCTATACCAACAACTAGGTGTTGCTTCTCTTCTTGGCGCTCTAATGCTGGTTCTGTTGTTCCCTATACAGACTTTTATCATTAGTAGAATGCAAAAGTGGTCCAAGGAAGGGTTGCAGCGTTCAGACAAGAGAATTGGTCTCATGAATGAAATTTTGGCTGCTATGGACACTGTAAAATGTTATGCGTGGGAGAGTAGTTTCCAATCTAAAGTACAAGTTGTCCGAAATGATGAATTATCATGGTTCCGGAAGGCATTATTACTTGCAGCGTGTAATGGATTTTTACTAAACAGCATTCCAGTTTTTGTAACTGTTATTTCATTTGGAGTGTTCACCTTGCTTGGAGGGGATTTAACACCTTCAAGAGCATTTACATCCCTTTCTTTGTTCGCTGTGTTACGGTTTCCCCTCGTCATGTTTCCTAATATTATTACTCAGGTTGTTAATGCAAATGTATCCTTGAAGCGTCTAGAAGAGTTGCTCTTAGCAGAAGAACGGATTCTTATGCCCAATCCACCTCTAGATCCAGGATTACCAGCCATCTCAGTGAAGAATGGAAACTTCTCATGGGATGCGAAGGCTGGGAGGCCTACATTGTCTAATGTCAATTTGGATATAACTGTTGGTAGCCTTGTTGCAATTGTGGGCAGTACTGGAGAAGGAAAGACATCACTTATATCTGCAATGCTTGGGGAGCTTCCACCTACTTCAGATGCTACTGTTGTTATAAGAGGGACAGTTGCTTATGTGCCACAAATTTCATGGATCTTTAACGCAACTGTGCGGGATAACATTTTATTCGGCTCTCACTTTGACCCTGTGAGATATGAGAGGGCAATAGATGTGAGTGAACTGCAGCATGACCTCGACTTGCTTCCTGGTGGTGACCTTACTGAAATTGGTGAAAGAGGGGTAAATATCAGTGGTGGTCAAAAACAAAGGGTATCTATGGCTAGAGCTGTCTACTCCAATTCAGATGTGTACATATTTGATGACCCTTTAAGTGCTCTTGATGCGCATGTTGGAAAACAGGTGTTTGATAAATGCATCAAAGGTGAATTGAGAGGAAAAACCCGAGTTCTTGTTACAAATCAGCTACATTTCCTTTCACAAGTCGATAGAATTATGCTGGTCCATGATGGTGTGGTAAAAGAAGAGGGAACATTTGAGGAACTCTCTAATAAAGGACCGCTGTTTCAAAAGCTTATGGAAAATGCAGGAAAGATGGAGGAGTATGCAGAAGAAAACAGAGACGGTGAAAGTAATGACCTAAAGTCCTCTTCAAAATCAGTTCCCAATGGAACACCTAATGATGTGGAAAAAATTGAAAACAAACAGAAAGAAGCCAAATCTGTTCTTATTAAGCAAGAAGAACGAGAAACAGGTGTTGTCAGTCTGAAAGTTCTACAGAGGTACAAGAATGCGTTAGGAGGATTTTGGGTGGTGCTTGGTCTGTTTACATGCTATATCTTAACAGAAGTGTTGCGAGTTTCTAGTAGCACATGGTTGAGCAATTGGACTGATCAGAGTGCGTCAGAGGGTTATAATCCTGGTTACTACAACCTGATATATGCAGCCCTATCATTTTGTCAGGTTTTGGTGACTTTAACAAATTCTTTCTGGCTAATCTTATCAAGTCTTTATGCTGCTAGAAGGTTGCACAATGCTATGCTCCACTCCATTTTACGGGCTCCTATGGCTTTTTTTCATACCAATCCTCTTGGGAGGATCATCAATAGGTTTGCAAAGGATTTAGGTGATATAGACCGTAGTGTTGCTCCATTTGTGAATATGTTTTTGGGCCAGGTTTCCCAGCTTCTTTCAACATTCATCTTGATAGGAATTATCAGCACAATGTCCTTGTGGGCAATAATGCCATTATTGGTGTTGTTTTATGGAGCCTATCTGTATTATCAGAGCACGGCCCGTGAAGTGAAGCGCTTAGATTCTATCAGCAGATCTCCTGTATATGCTCAATTTGGAGAAGCACTTAACGGTCTATCAACTATCCGGGCTTACAAAGCTTATGATCGAATGGCTGACATTAATGGAAAAGCCATGGACAATAATATACGATTCACTCTAGTAACCATGAGTGGAAACCGATGGCTTGCAATTCGTTTGGAAACTTTGGGCGGCCTTATGATATGGTTTACTGCAACTTTTGCTGTATTGCAAAATGGGAGGGCTGAGAACCAGCAGGCATTTGCATCCACAATGGGGCTGCTTCTTAGTTATGCTTTAAATATTACTAGTTTGCTCACTTTGGTGCTCAGACTTGCAAGTCTGGCTGAGAATAGTTTAAATGCAGTTGAGCGTGTGGGTACTTACATTGATTTGCCTTCAGAGGCCCCATCTATCATTGAGAGTAACCGTCCTCCTCCTGGGTGGCCATCATCTGGATCAATTAGATTCGAAGATGTTGTTCTTCGCTATAGGCCTGAACTTCCACCTGTCTTACATGGGTTGTCTTTCACAATTTTTCCAAGTGACAAGGTTGGCATTGTTGGTAGGACAGGAGCAGGAAAAAGTAGCATGTTTAATGCTTTATTTCGGCTTGTAGAGTTGGAAAGAGGAAAGATCTTAATTGATGACTTTGAAATTGCTAAGTTCGGACTGACTGATTTACGTAAAGTTCTTGGAATTATCCCACAGTCACCTGTTCTCTTTTCAGGAACTGTGAGATTTAATCTTGATCCTTTTAATGAGCACAATGATGCTGACCTTTGGGAGGCTCTGGAGAGAGCACATTTGAAGGATGTAGTTCGAAGGAATTCATTGGGACTGGAAGCTGAGGTATCTGAGGGAGGTGAGAATTTCAGCGTTGGACAGAGGCAACTATTGAGTCTTGCTCGTGCATTATTACGGAGATCGAAGATATTAGTACTTGACGAGGCAACTGCGGCGGTTGATGTCAGAACTGATGCACTTATACAAAAAACAATTCGGGAAGAGTTCAAATCCTGCACTATGTTAATTATAGCTCATCGACTTAATACCATTATCGACTGTGATCGGATCCTTCTGCTTGATGGTGGTCGGGTTCGCGAATATGGGACCCCTGAGGAGCTACTGTCAAACGACTGTAGTGCTTTCTCCAAGATGGTACAAAGTACCGGAGCTGCAAATGCTCAATATCTACGCAGCTTAGTGCTCAATGGGGATGGTGGAAACAAGCCAGTGCAAGAGGGGAAGAATATCGATGGACAAAGAAGATGGTTAGCTTCTTCTCGCTGGGCGGCTGCAGCACAATTTGCCCTTGCTGTCAGCATGACCTCATCCCAGAATGACCTTCGCCAATTAGAAATTGAAGATGACAACAGCATTCTCAAGACAGCCAAGGATGCCGTGATAACATTGCAGGGAATTTTGGATGGAAAGCATGATAAAGAAATTGAGGAATCCTTAGATCAACACCAGATATCACCAAACAGATGGTGGTCATCCTTTTTCAAGATGATTGAGGGTCTGGCTATGTTGAGCAGATTGGCCCGAAACAGGTTGCTTCAATCTGACTACAATGTTGAAGACACCTCAATAGATTTTGACCATGTTGACATGTAG 4650 0.4202 MEYGQKWFGMPLVLIRLVQLVMGLSVLNLDGQTGIAPFEMVSLIVEALAWCSMLVLILLETRVYVYEFRWFVRFAVIYTIVGDAVMFNLILSAKEFYTRSMIYLYTSEVVIQALFGILLLVYIPTLDPYSGYVPIRGELVTDIAYEELPGGEQICPERQGNIFSRITFAWMNPIMKLGYERPLTEKDVWKLDTWDRTVTLNNKFQIRWNVESQKSKPWLLRALNSSLGGRFWWGGFWKIGNDVSQFLGPLILNQLLQSMQRGDPAWIGYVYAFSIFVGVVFGVLCEAQYFQNVMRVGFWLRSTLVAAVFRKSLRLTHEARKQFASGKITNLMTTDAEALQQICQSLHTLWSAPFRITVAMVLLYQQLGVASLLGALMLVLLFPIQTFIISRMQKWSKEGLQRSDKRIGLMNEILAAMDTVKCYAWESSFQSKVQVVRNDELSWFRKALLLAACNGFLLNSIPVFVTVISFGVFTLLGGDLTPSRAFTSLSLFAVLRFPLVMFPNIITQVVNANVSLKRLEELLLAEERILMPNPPLDPGLPAISVKNGNFSWDAKAGRPTLSNVNLDITVGSLVAIVGSTGEGKTSLISAMLGELPPTSDATVVIRGTVAYVPQISWIFNATVRDNILFGSHFDPVRYERAIDVSELQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGKQVFDKCIKGELRGKTRVLVTNQLHFLSQVDRIMLVHDGVVKEEGTFEELSNKGPLFQKLMENAGKMEEYAEENRDGESNDLKSSSKSVPNGTPNDVEKIENKQKEAKSVLIKQEERETGVVSLKVLQRYKNALGGFWVVLGLFTCYILTEVLRVSSSTWLSNWTDQSASEGYNPGYYNLIYAALSFCQVLVTLTNSFWLILSSLYAARRLHNAMLHSILRAPMAFFHTNPLGRIINRFAKDLGDIDRSVAPFVNMFLGQVSQLLSTFILIGIISTMSLWAIMPLLVLFYGAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKAMDNNIRFTLVTMSGNRWLAIRLETLGGLMIWFTATFAVLQNGRAENQQAFASTMGLLLSYALNITSLLTLVLRLASLAENSLNAVERVGTYIDLPSEAPSIIESNRPPPGWPSSGSIRFEDVVLRYRPELPPVLHGLSFTIFPSDKVGIVGRTGAGKSSMFNALFRLVELERGKILIDDFEIAKFGLTDLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVVRRNSLGLEAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDGGRVREYGTPEELLSNDCSAFSKMVQSTGAANAQYLRSLVLNGDGGNKPVQEGKNIDGQRRWLASSRWAAAAQFALAVSMTSSQNDLRQLEIEDDNSILKTAKDAVITLQGILDGKHDKEIEESLDQHQISPNRWWSSFFKMIEGLAMLSRLARNRLLQSDYNVEDTSIDFDHVDM 1549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0853 1549 Pfam ABC transporter 561 696 IPR003439 GO:0005524
Lele35g0853 1549 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 545 767 IPR003439 GO:0005524
Lele35g0853 1549 CDD ABC_6TM_ABCC_D2 844 1140 IPR044726 GO:0140359
Lele35g0853 1549 ProSitePatterns ABC transporters family signature. 1302 1316 IPR017871 GO:0005524|GO:0016887
Lele35g0853 1549 Gene3D - 1148 1401 IPR027417 -
Lele35g0853 1549 Gene3D - 539 792 IPR027417 -
Lele35g0853 1549 CDD ABCC_MRP_domain1 543 743 - -
Lele35g0853 1549 FunFam ABC transporter C family member 2 207 528 - -
Lele35g0853 1549 CDD ABCC_MRP_domain2 1163 1383 - -
Lele35g0853 1549 FunFam Multidrug resistance-associated protein member 4 1149 1401 - -
Lele35g0853 1549 FunFam ABC transporter C family member 2 808 1146 - -
Lele35g0853 1549 SUPERFAMILY ABC transporter transmembrane region 217 523 IPR036640 GO:0005524|GO:0016020
Lele35g0853 1549 Coils Coil 801 821 - -
Lele35g0853 1549 SMART AAA_5 570 744 IPR003593 -
Lele35g0853 1549 SMART AAA_5 1191 1384 IPR003593 -
Lele35g0853 1549 ProSitePatterns ABC transporters family signature. 669 683 IPR017871 GO:0005524|GO:0016887
Lele35g0853 1549 Pfam ABC transporter 1182 1330 IPR003439 GO:0005524
Lele35g0853 1549 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 232 511 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele35g0853 1549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 541 766 IPR027417 -
Lele35g0853 1549 MobiDBLite consensus disorder prediction 774 804 - -
Lele35g0853 1549 Pfam ABC transporter transmembrane region 847 1102 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele35g0853 1549 Pfam ABC transporter transmembrane region 235 499 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele35g0853 1549 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 157 1405 - -
Lele35g0853 1549 FunFam ABC transporter C family member 2 537 783 - -
Lele35g0853 1549 SUPERFAMILY ABC transporter transmembrane region 842 1145 IPR036640 GO:0005524|GO:0016020
Lele35g0853 1549 CDD ABC_6TM_ABCC_D1 233 518 IPR044746 GO:0140359
Lele35g0853 1549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1155 1398 IPR027417 -
Lele35g0853 1549 Gene3D ABC transporter type 1, transmembrane domain 207 529 IPR036640 GO:0005524|GO:0016020
Lele35g0853 1549 Gene3D ABC transporter type 1, transmembrane domain 805 1146 IPR036640 GO:0005524|GO:0016020
Lele35g0853 1549 MobiDBLite consensus disorder prediction 787 801 - -
Lele35g0853 1549 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1165 1399 IPR003439 GO:0005524
Lele35g0853 1549 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 845 1128 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0853 Lele-ChrLele35 7233872 7309764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0853 536 969 Calmodulin-binding Proteins AT2G36910 25.703 1.49e-32 136