Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0842 ATGGAAGCCTACGGTGGCTACTTGGTGGATGAGAAAGCTGCTAGGGTTGAGGATGCTTTCCTTGAATTTCTGAAGAGCTTCCGGGTCGGCCAGCAGAGAGAGCCCTATTACGAAGGTGAGATTGAAGCAATGAGAGCCAACGAATCCAACACGATGTTCGTTGATTTCTCGCATGTCATTCTTTACAACGATCTTCTTCAGAAAGCCATAGCTGATGAATACTTGAGATTTGAGCCCTATCTGAAGAACGCTTGCAAGAGGTTTGTTATGGAGTTAAAGCCAACGGTCATATCTGACGATAACCCTAACAAAGACATAAATATTGCTTTCTTCAACATTCCAATCGTTAAGAGGTTAAGGGAACTTACTACAGCTGAAATTGGAAAACTAGTGTCTGTGACTGGAGTGGTGACAAGGACAAGTGAGGTTCGACCTGAGCTTCTCCAGGGAACTTTCAAGTGCTTAGAATGTGGTGGGGTTGTAAAGAATGTTGAACAGCAATTCAAATATACCGAGCCAGTGGTCTGTCTAAATGCAACCTGTTTAAAGGCGGCTAGGTGGGCATTGCTGCGGCAAGAGAGCAAATTTACTGACTGGCAGAGGGTCAGAATGCAGGAGACATCTAAAGAGATACCTGCTGGATCTCTTCCTAGGTCATTGGATGTTATTCTACGTCATGAGATTGTGGAACAGGCTAGGGCCGGTGACACGGTGATTTTTACAGGAACTGTGGTTGTCATACCTGATATATTGGCATTGGCATCCCCTGGAGAGAGAGCTGAATGCCGCCGGGAAAATTCTCAACGCAAGAGTTCTTCAGTTGGAACTCAAGGCGTGCAGGGTCTGAGGGCATTGGGAGTAAGAGACCTCTCATATCGACTAGCTTTTATAGCAAACTCTGTTCAGATATGTGATGGGAGAGGAGAAACAGACATCAGGAATAGAAAGAAGGATGTGGATGACGAAGAGCAGCAATTTACAACACAGGAGCTTGATGAAGTTAAAAGAATGAGGAACACTCCTGATTTCTTTAACAAACTTGTTGACAGTATAGCACCAACTGTCTTTGGTCACCAAGATATAAAGCGAGCAATCCTTCTTATGCTTATGGGTGGAGTACACAAATTTACTCATGAAGGCATCAATCTCAGAGGAGACATTAATGTTTGTGTTGTTGGGGATCCCAGTTGTGCCAAGTCGCAGTTTCTCAAATATACTGCTGGCATAGTTCCAAGATCTGTGTATACATCTGGAAAATCATCCTCTGCTGCTGGTTTGACTGCAACAGTTGCCAAGGAGCCTGAAACTGGGGAGTTTTGCATTGAGGCTGGTGCTTTGATGCTTGCTGACAATGGCATTTGCTGCATTGATGAATTTGACAAGATGGATGTCAGAGATCAGGTTGCAATTCATGAGGCCATGGAGCAGCAGACAATTAGTATCACAAAGGCAGGAATACAAGCCACACTTAATGCACGTACTTCCATTCTTGCAGCTGCCAACCCTACTGGGGGACGCTATGACAAGTCTAAACCTCTCAAGTATAACGTGGCCCTTCCACCAGCCATTTTATCAAGGTTCGATCTAGTATATGTTATGATTGATGACCCAGATGATCAGACAGATTACCACATAGCCCATCACATCGTGAGAGTTCATCAAAAGCGTGAAGATGCTCTGACTCCATCATTCAGTACAGCAGAACTAAAGCGATATATAGCTTATGCAAAAACTCTCAAACCAAAGCTCAATCCAGATGCCAGAAAACTATTGGTAGAGTCCTATGTTGCCCTACGGAGAGGAGATATGAATCCTGGTAGTAGGGTTGCATATCGCATGACTGTTAGGCAGTTGGAGGCATTAATCAGGCTGTCTGAGGCCATTGCACGGTGTCATTTGGAAACTCAGGTGCTTGTGGAGTCCAGTGAAATTGATCTGTCTGAATTTCAAGAAGAAAACCAGGATGACAGCACTGGTGGTGATGATGGACCTGATGGCAGAAACGATGATGATGATCAAGGAGGAAGCGCTACAGAACAGAAAGCAGATGGAACTAAAGAGGGTGCAGCAGATGGTTCTACTGCTCAACAAGGGAAGAAACTTATTATAAGCGATGAATATTTCCAGAGAGTTACCCAGGCCCTTGTTATGCGTCTTAGACAGCATGAAGAAACTGTCACCCAAGAAGGAACTGGTTTGGCTGGAATGAGGCAACGAGATTTGATCAAATGGTATGTGAGCCAGCAAAATGAGAAAAATAATTACAGTTCAATGGAGGAGGCAGCTGCTGAAATTACCAAAATTAAAGCTATTATAGAGAGTTTGATTCGGAGAGAGGGCCATTTGATAGTATTAGACGATGGTAGGCAAGCAGCATCCAAAGCCGCAGGTGCAGAGCATGTGACATCAACATCGAGAAATGACCGAATCCTGGCTGTGGCTCCAAACTATGTTGTCGATTGA 2463 0.4442 MEAYGGYLVDEKAARVEDAFLEFLKSFRVGQQREPYYEGEIEAMRANESNTMFVDFSHVILYNDLLQKAIADEYLRFEPYLKNACKRFVMELKPTVISDDNPNKDINIAFFNIPIVKRLRELTTAEIGKLVSVTGVVTRTSEVRPELLQGTFKCLECGGVVKNVEQQFKYTEPVVCLNATCLKAARWALLRQESKFTDWQRVRMQETSKEIPAGSLPRSLDVILRHEIVEQARAGDTVIFTGTVVVIPDILALASPGERAECRRENSQRKSSSVGTQGVQGLRALGVRDLSYRLAFIANSVQICDGRGETDIRNRKKDVDDEEQQFTTQELDEVKRMRNTPDFFNKLVDSIAPTVFGHQDIKRAILLMLMGGVHKFTHEGINLRGDINVCVVGDPSCAKSQFLKYTAGIVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDVRDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALPPAILSRFDLVYVMIDDPDDQTDYHIAHHIVRVHQKREDALTPSFSTAELKRYIAYAKTLKPKLNPDARKLLVESYVALRRGDMNPGSRVAYRMTVRQLEALIRLSEAIARCHLETQVLVESSEIDLSEFQEENQDDSTGGDDGPDGRNDDDDQGGSATEQKADGTKEGAADGSTAQQGKKLIISDEYFQRVTQALVMRLRQHEETVTQEGTGLAGMRQRDLIKWYVSQQNEKNNYSSMEEAAAEITKIKAIIESLIRREGHLIVLDDGRQAASKAAGAEHVTSTSRNDRILAVAPNYVVD 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0842 820 ProSiteProfiles MCM family domain profile. 343 549 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele35g0842 820 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 11 759 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lele35g0842 820 SUPERFAMILY Nucleic acid-binding proteins 20 249 IPR012340 -
Lele35g0842 820 Gene3D - 321 650 IPR027417 -
Lele35g0842 820 Pfam MCM N-terminal domain 18 112 IPR027925 -
Lele35g0842 820 Coils Coil 758 778 - -
Lele35g0842 820 MobiDBLite consensus disorder prediction 645 659 - -
Lele35g0842 820 Gene3D - 697 820 - -
Lele35g0842 820 Gene3D - 119 247 IPR012340 -
Lele35g0842 820 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 116 128 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Lele35g0842 820 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 219 230 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Lele35g0842 820 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 74 86 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Lele35g0842 820 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 166 183 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Lele35g0842 820 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 278 299 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Lele35g0842 820 MobiDBLite consensus disorder prediction 645 697 - -
Lele35g0842 820 FunFam DNA helicase 328 649 - -
Lele35g0842 820 Pfam MCM6 C-terminal winged-helix domain 699 819 IPR041024 -
Lele35g0842 820 ProSitePatterns MCM family signature. 452 460 IPR018525 GO:0003677|GO:0005524|GO:0006260
Lele35g0842 820 Pfam MCM AAA-lid domain 568 640 IPR041562 -
Lele35g0842 820 Gene3D - 8 115 - -
Lele35g0842 820 FunFam DNA helicase 696 820 - -
Lele35g0842 820 CDD MCM6 346 640 - -
Lele35g0842 820 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 641 IPR027417 -
Lele35g0842 820 SMART mcm 115 644 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lele35g0842 820 Pfam MCM P-loop domain 331 553 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele35g0842 820 PRINTS Mini-chromosome maintenance (MCM) protein family signature 444 458 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele35g0842 820 PRINTS Mini-chromosome maintenance (MCM) protein family signature 472 485 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele35g0842 820 PRINTS Mini-chromosome maintenance (MCM) protein family signature 496 508 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele35g0842 820 PRINTS Mini-chromosome maintenance (MCM) protein family signature 384 399 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele35g0842 820 PRINTS Mini-chromosome maintenance (MCM) protein family signature 523 531 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele35g0842 820 MobiDBLite consensus disorder prediction 660 677 - -
Lele35g0842 820 Pfam MCM OB domain 119 247 IPR033762 -
Lele35g0842 820 Gene3D - 146 197 - -
Lele35g0842 820 FunFam DNA helicase 146 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0842 Lele-ChrLele35 7015505 7021517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0842 1 820 Core DNA Replication Machinery Family AT5G44635 71.329 0.0 1261