Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0792 ATGTACTTTGGGAAATCTCCATTATTAGGGTTAGGGTTTGATTCAGAGTTATCGTCTTCTCCAGTAGGTTTCCCTTCTGCAATACCTAAGCTCAAGTATTCTTCAGAATCTTCTGTCGAATTAGCCTTAGCCAATACCATGGCCAAGAACAATAGAAAGAAAACAAGGCAAGATTTCGATTCCATTATTGTTTCAATGAATATTGTGCTTTGTATATTGCTTGCTGATACAGTATGGAGGGAGGCTTCGGCTTTTTTATACAAGAAGATGAAGTGGTTCTGTATAAAGATGGAAGGCATGAGCAAGAGGGACCTTCAAATTCTATCAGAATCTCATGCAGTTCAAGCTGTCCAGCAGCCACAGTTTATGCAGCCTATTGATGTTGAGGCTATTGATGATGATGTTATTGAATCTACGCGAAGTGCTTTTGTTGAGGCTAGAAATAATTCAAGAAGAAATCGTGGGAGGACTATAGTTGATGTGGATTTAGTTGCTACTTTAATAGTGTGTTTCTGGGTAGATTGCCTTCTAATGAAAGCCCATACGCCAAGTTGTGGTGTTTTCTGGAATTGTATCACCGAGAATTTTGGTTATTCTAGGATGTGGTATTGGTATGGACAGGATCAGGATAATGTGAATTGGATGACTGAAATTTCTCCCAACAATCAAAGAAGAGATTCTCTGTACCAAACAGTTCCTAGTTGTGGTCAATATATAAACTTGGAAGGCAGTAGCAATCCTGAGAGTGGGGGAAATATAAAGTCAGCTGAGCCTCCAAAGGAGCCTGTCTTTAATCGTCCAATATGTAGAGAACCATTTGTGGAAGAAATGTTGACAAGGTGTGGTCATATATTTTGTAAGAAATGCATTAAGGCTGCTATAAAAGCACAAGTTAAATGCCCTACATGTGCCCAAAAGATTACTGCAACTAGTAGTTCTCCTTAA 945 0.3894 MYFGKSPLLGLGFDSELSSSPVGFPSAIPKLKYSSESSVELALANTMAKNNRKKTRQDFDSIIVSMNIVLCILLADTVWREASAFLYKKMKWFCIKMEGMSKRDLQILSESHAVQAVQQPQFMQPIDVEAIDDDVIESTRSAFVEARNNSRRNRGRTIVDVDLVATLIVCFWVDCLLMKAHTPSCGVFWNCITENFGYSRMWYWYGQDQDNVNWMTEISPNNQRRDSLYQTVPSCGQYINLEGSSNPESGGNIKSAEPPKEPVFNRPICREPFVEEMLTRCGHIFCKKCIKAAIKAQVKCPTCAQKITATSSSP 314
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0792 314 Pfam Zinc finger, C3HC4 type (RING finger) 267 303 IPR018957 GO:0046872
Lele35g0792 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 223 314 IPR013083 -
Lele35g0792 314 ProSiteProfiles Zinc finger RING-type profile. 267 303 IPR001841 -
Lele35g0792 314 SUPERFAMILY RING/U-box 267 309 - -
Lele35g0792 314 PANTHER ELFLESS, ISOFORM B 111 310 - -
Lele35g0792 314 ProSitePatterns Zinc finger RING-type signature. 281 290 IPR017907 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele35g0792 Lele-ChrLele35 6315303 6319318 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0792 126 309 C3H Transcription Factor Family AT5G48655 33.152 7.08e-21 87.0