Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0786 ATGTTTAGAAAAATATCTGTCCATGTTTACTGCTCGTGGACCAAAGAAAGTCATTCTGAGAAACCAAAGCGAAAAATATTGATCATCACTTTTGAGAGAAACTGTGATCAATTCATTTCCATGGAGGAGGAGAGGCCGATCAATATTTACCTAAGTCACAGAGGTGATGACGACAACGTTTATGAATTCACTGATAAGCTTTGTGCTGCTTTTGAAACTGCAGGTTTAACAACCTTTGAGCAAGATCAGGATCTTGAAACAGAGGACTCACTTCCAGATTATCTTCTGAAACCAATTCATGAATCATGGGTCTTTATATTTTTCTTCTCCAAAAACGATGCTACTTCAAAAGGGCACTTAATCGAACTCCAAGAAATTTGTTGGCACATTCATAGGCCACGTGGTGTGATACTCATCTTCTACGATCTTGACGTAAACCAGGCAAGGAAGGTTCTGGATGAGTTCTATAACGATGTCGCCAGTCAATTCAACAACTTCACAAGTGGAACGCCGGATGATCTTTTTGAGATGTACTGTATAATGATCCAACCACGAAACTTGGAGATCAAAGATCCAGAGACTTGGACGTCAAACCAACGCCGGTTTCTCGTTGTTCTTGATGGTGTTGATCATGTAGAAAATAATCTTGATGCACTGAATTCTCTTCTGAAATCCGAATGGTTCGACCGAGGAAGTAGAATCATCATTACAACTAGAGATGAACGAGTCCTTGAAAAGTGTCAAGTGGAACATGTTTACAAACCGGAATTATTGACTGAGCGTGAAGCTCTTAAACTCTTCTGTATAAAAGCTTTTGGACGTGATTATGAAGAGATAACACAACTAGAGAGTGAATTTCAAGAGATGGCAAGTAGTCTAAGTGAACGCACAGCTATGGAAAGATTTGAAGCCATATCCCTGGATTTGGAGGACTCTAGAAGGACCACATTGAGAATTGAAGCTTTATCATATATGACCAATCTTAGATTACTCATATTTCGTAATGTGAACTTTTCTGGAACCCTCAGTTCTCTTTCTAATGAGCTACGATATGTCTCATGGCATCAATATCCTTTCACTAGTTTGCCATCTAGTTTTGAGCCTCAAGCACTTGTGGAATTGATTATGGTAGATAGTAACATCAAAGAATTATGGGAAGGTAAAAAGGTGCTTCCTAAGTTGAAAATTTTGATTCTTAGTGGCTCCAAAAATTTGATTAAGACGCCAAATTTGGGAGGGGTTCCAAATCTTGAAAGATTAGAACTTGAAGGATGTACTGGATTGCTGCAATTGCATGAATCTATTGCTAGAATTCCAAAGCTCAAATTCTTAAATTTGAGAAACTGCATTAATCTTGTTAGTATTCCGAATATGTTATTTGGTCAACGCTCTTTGGAAATTCTAAATCTTGCTGGCTGCTCAAAGTTTGCTTATTGTTTGAGATTTTATCCTTTGAAGAGCTCGATTGAGGTGAAACTGCTCAGCATTTGGTATCAACATTTCTTAGAAAGAATGTTGTATTTTATTCTCTTTGTTTTGCCCCAAAATAAAAATTACCATTGCCTTGTTTGTTGCAGTCTTTTTTACTTGCTCTGTAGGGGCAAATAG 1608 0.3775 MFRKISVHVYCSWTKESHSEKPKRKILIITFERNCDQFISMEEERPINIYLSHRGDDDNVYEFTDKLCAAFETAGLTTFEQDQDLETEDSLPDYLLKPIHESWVFIFFFSKNDATSKGHLIELQEICWHIHRPRGVILIFYDLDVNQARKVLDEFYNDVASQFNNFTSGTPDDLFEMYCIMIQPRNLEIKDPETWTSNQRRFLVVLDGVDHVENNLDALNSLLKSEWFDRGSRIIITTRDERVLEKCQVEHVYKPELLTEREALKLFCIKAFGRDYEEITQLESEFQEMASSLSERTAMERFEAISLDLEDSRRTTLRIEALSYMTNLRLLIFRNVNFSGTLSSLSNELRYVSWHQYPFTSLPSSFEPQALVELIMVDSNIKELWEGKKVLPKLKILILSGSKNLIKTPNLGGVPNLERLELEGCTGLLQLHESIARIPKLKFLNLRNCINLVSIPNMLFGQRSLEILNLAGCSKFAYCLRFYPLKSSIEVKLLSIWYQHFLERMLYFILFVLPQNKNYHCLVCCSLFYLLCRGK 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0786 535 Gene3D - 40 216 IPR035897 -
Lele35g0786 535 SUPERFAMILY Toll/Interleukin receptor TIR domain 43 155 IPR035897 -
Lele35g0786 535 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 198 291 IPR044974 GO:0006952
Lele35g0786 535 Gene3D Ribonuclease Inhibitor 272 488 IPR032675 -
Lele35g0786 535 SMART till_3 46 185 IPR000157 GO:0007165
Lele35g0786 535 Pfam TIR domain 49 156 IPR000157 GO:0007165
Lele35g0786 535 ProSiteProfiles TIR domain profile. 45 163 IPR000157 GO:0007165
Lele35g0786 535 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 289 IPR027417 -
Lele35g0786 535 SUPERFAMILY L domain-like 305 496 - -
Lele35g0786 535 Pfam NB-ARC domain 199 290 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0786 Lele-ChrLele35 6238299 6242435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0786 297 477 WRKY Transcription Factor Family AT4G12020 41.294 5.66e-26 111