Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0784 ATGGAAACAAGCAGAGCTGAGGGAAAGAGGAGCTCGAGGTACAAGAAAGAGGAAGCAGAGGAGGAGGAAGACGAAGAGGAAGAAGTAGAAGTAGAAGAAGAAGACGATGAAGAGACAGACAGTGAACTTGGCTCTGCTGAAGAACATGGTAGAAATAAGAGAAGGGTTATATCAAATACACACAGCCGCAGGAGAGGCCCCAGACCAGGAAGCTCGGCTGCGGCGGCACCACCGTGTTGTCAGGCCGACGATTGCCACGCTGATCTGAGAAACGCCAAACAGTATCACAGGCGGCACAAGGTCTGTGAGTTCCACGCCAAAGCACCGGTCGTACTCATTTCAGGGAATGAACAACGATTTTGCCAGCAATGTAGCAGGTTTCATGAGCTTTCAGAGTTTGACAACTCAAAGAGGAGTTGTAGAAGGCGTTTGCAAGGGCATAATGAGAGACGACGAAAGGTTGCATCTGATTATCATGGAGAAGGTTATCATTAA 495 0.4869 METSRAEGKRSSRYKKEEAEEEEDEEEEVEVEEEDDEETDSELGSAEEHGRNKRRVISNTHSRRRGPRPGSSAAAAPPCCQADDCHADLRNAKQYHRRHKVCEFHAKAPVVLISGNEQRFCQQCSRFHELSEFDNSKRSCRRRLQGHNERRRKVASDYHGEGYH 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0784 164 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 35 153 IPR044817 GO:0003677
Lele35g0784 164 Coils Coil 14 39 - -
Lele35g0784 164 Gene3D - 70 141 IPR036893 GO:0003677|GO:0005634
Lele35g0784 164 MobiDBLite consensus disorder prediction 1 18 - -
Lele35g0784 164 FunFam Squamosa promoter-binding-like protein 14 71 141 - -
Lele35g0784 164 MobiDBLite consensus disorder prediction 150 164 - -
Lele35g0784 164 MobiDBLite consensus disorder prediction 1 80 - -
Lele35g0784 164 ProSiteProfiles Zinc finger SBP-type profile. 77 154 IPR004333 GO:0003677
Lele35g0784 164 MobiDBLite consensus disorder prediction 19 43 - -
Lele35g0784 164 SUPERFAMILY SBT domain 77 158 IPR036893 GO:0003677|GO:0005634
Lele35g0784 164 MobiDBLite consensus disorder prediction 144 164 - -
Lele35g0784 164 Pfam SBP domain 80 153 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0784 Lele-ChrLele35 6204646 6207176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0784 63 162 SBP-box Gene Family AT1G53160 61.386 6.34e-38 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele35g0784 SBP 1.4e-32 No_clan