Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0777 ATGTCAGTCTTCGCTTCTTCAGATAGTCACTTCTACGGCCCTGACGCCGATGCCATTACGTCCGATAAGTCCGATGAGGGTCAGAAAGATTTTGGAAAAGATGGGACTATTAACCTGCGGAGAGATGGCATTGTTGAGAAGGCTAGTGGTGATCAAAATCATATAAAGCATATCAGGCACTTGAACATGCAATTAGGAGATGCTATGAGCCCAACAACATCAAGGCATCCTTCTCCTGACTTGAGGACCAGAGATCTGTCTCCCTGTGCTGAGATTAAAGTTGGAAACAGGTGTCATTCTAACATATGTGCTTTTTATGCCAAAGGATGGTGTATCAAGGGTAATTCTTGTAGGTTTGTTCATATAAAAGATCCTGAAAATAAATCAGGCCAGCAGACTGAAGGAGAATTGGTTACTCAAAATTGGAAGAGAGAGGCGCAACCAGAGGAAGGTATTGGAGATGATGTTAAGAGATCAAGGATGCCTTGTACTCAAGTTCCATTGGCTGCTACACAAGAAAGAACATCTCTGTATTCATCTGAATTTTCCTTCAACCCAATAATCCAGAAAGAAGTAGGCCCAAGCTGGCATCCAGACAAAAGTTGGTCTGTCTCTTCTTTCCCTTCCTGTCTAACCCATACAGAGGGAATGACTACCACTCAAGTTGAGGGTCATTCGCCTAATTTAAACATAGCTACTGATCTTCCAACTACATGTATGTCACTATCCAACCATATTCCTTCTCGATCAGCATGTTCATTTTCTTTTAGTGGATCCTTAAGTGAAAGTTCTATAGATTCTCAACAACTTTTGGACAGTGGCATGGCATATAATGACAGCAGATCCACTTTCTCTGGTTCAGAAAAGGAAGTTTTGGCTCCAAGTAGTTCATTAGGGGTTTCACCACACCCAACTGGATGTAAATTAAAATTCTCTTCATATGATTGGGAGCCATCTGTACCTTTCAAACCTTCTGTTTTTTTTACTCCTTCAAGTAGATCATCTGTAGAAGATCAAAAAGACCATTTTCACATTAGTGTGGAGATATCCAATATAGGGGATGGATCCAGGAAAGCTTTCATTTTATCTCAAAGGCCATCCATTCAGACTTCATCTCAGGTTACTACAAATGGTGAGTCTGTTGAAGCTGCAAATCAGGGATTAGATCTTCATGGTGCCAAAAGTTCTGTATCTCCTCATAATAGATGTAATAAAACTGAGCCAGAGGAGAGTTGTGTTCCTCATGAAAAAAGTTTTGTTACAACTGAAACAGATAGAATAGTAGCAAGACATCTAAATTGCCAATTTGGAAGGGTTGGCATGGGACTCAATACCTTTGAAGATGTTAAAAATATAGGAAAAGAACAAACTGAGCGTGATGCTAGACCTCAAGTTGAAGTAACCGAGTACAAAAAACAAAGAGTAGGTAGGGATGAGAAAAACAGCGAAATGGATAATAATCTTCAGAAGGATGTTGGTGTGCAGATAGAATCAATGGAACTAAGACATTTCCGTTTTGCTCTTGTTGATCATGTGAAAGAGATTTTAAGACCAGCGTGGCTGAAGGGTTGCCTCAGCAAGGATGCTCATAACATGATTGTTAAAAAATCAGTTGACAAGATTATTAGAACCTTACAGCCTGAGCAAATTCCACCAAATGAGGATTCTGTCAAGAAGTACCTTTCTTTTTGTCAGATGAAAATTGCAAATCTGGTCAAGGATTATACCAGTATATATGGCAAGGTGATTGAGGGATCTTTTGTCGTCATCATAGCAGATTGTGTTAGATCATTCAATGGGACTGATCTGGCTTTTATGGATTTGGGAATTGAGTATTTCATTTATTGCTGTGGTTTGGGTATGCATCTCAAATCTCAATCTTAA 1884 0.3954 MSVFASSDSHFYGPDADAITSDKSDEGQKDFGKDGTINLRRDGIVEKASGDQNHIKHIRHLNMQLGDAMSPTTSRHPSPDLRTRDLSPCAEIKVGNRCHSNICAFYAKGWCIKGNSCRFVHIKDPENKSGQQTEGELVTQNWKREAQPEEGIGDDVKRSRMPCTQVPLAATQERTSLYSSEFSFNPIIQKEVGPSWHPDKSWSVSSFPSCLTHTEGMTTTQVEGHSPNLNIATDLPTTCMSLSNHIPSRSACSFSFSGSLSESSIDSQQLLDSGMAYNDSRSTFSGSEKEVLAPSSSLGVSPHPTGCKLKFSSYDWEPSVPFKPSVFFTPSSRSSVEDQKDHFHISVEISNIGDGSRKAFILSQRPSIQTSSQVTTNGESVEAANQGLDLHGAKSSVSPHNRCNKTEPEESCVPHEKSFVTTETDRIVARHLNCQFGRVGMGLNTFEDVKNIGKEQTERDARPQVEVTEYKKQRVGRDEKNSEMDNNLQKDVGVQIESMELRHFRFALVDHVKEILRPAWLKGCLSKDAHNMIVKKSVDKIIRTLQPEQIPPNEDSVKKYLSFCQMKIANLVKDYTSIYGKVIEGSFVVIIADCVRSFNGTDLAFMDLGIEYFIYCCGLGMHLKSQS 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0777 627 SUPERFAMILY CCCH zinc finger 99 121 IPR036855 GO:0046872
Lele35g0777 627 ProSiteProfiles Zinc finger C3H1-type profile. 97 124 IPR000571 GO:0046872
Lele35g0777 627 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 102 121 IPR000571 GO:0046872
Lele35g0777 627 MobiDBLite consensus disorder prediction 19 36 - -
Lele35g0777 627 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 69 580 - -
Lele35g0777 627 MobiDBLite consensus disorder prediction 1 36 - -
Lele35g0777 627 Gene3D - 90 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0777 Lele-ChrLele35 6150957 6156155 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele35g0777 zf-CCCH 0.00032 CL0537