Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0756 ATGCAGGGCTTGGTTCCTATGGGGGGTTTGATCGATCTCAATACTACGGAGGACGATGAAACGCCGTCGTCTCTTTCCTCGGCGGCTTCTTCTTCGTCCTCTCACTCTGGTGTTGTAACTACTACTACTACTACTTCGGCCCCTTCTTCTTCTAACGCTGCTGTGTGCTTGGAGCTATGGCACGCATGTGCGGGTCCAATGATCTCGTTGCCCAAGAAAGGAAGCGTTGTTGTGTACTTCCCACAGGGCCACATGGAACAGCAGCTTCAGGATTTTGCGGTCGATGCCTTTAATATCAATTTCCCATCTCATGTTTTCTGTCACATACTTGATATTAAGCTCCATGCGGAGGAAGGGAGCGATGAAGTGTATTGCCAGGTCTCGTTGGTTCCTGAGAGTGAGCAAGTGAAACCAAAACTGCCAGAAGGAGAACTTGATGCTGATGGTGAAGAGGAGGATGCTGATGCTGTGGTGAAGTCCACGGCACCCCACATGTTCTGCAAGACTCTGACAGCTTCTGATACTAGCACTCATGGTGGATTTTCTGTGCCTCGTCGAGCTGCTGAAGATTGCTTCCCTCCCCTGGATTACACCCAACAGAGACCTTCACAGGAGCTTGTGGCAAAGGATCTGCGCGGCCTGGAATGGAGGTTCCGACATATTTACAGAGGTCAACCAAGGAGGCATTTGCTCACAACTGGATGGAGTGCATTTGTAAACAAGAAGAAGCTTGTGTCTGGAGATGCTGTCTTGTTTCTTCGGGGCGGGGATGGAGAACTGAGATTGGGAATTCGTAGGGCTGCTCAATTAAAACGTGGTGGTACTTTATCAGTGCCATCTGCTTATCAATTGAATCCTAGCGCTCTCATGGATGTGATTAATGCTTTATCCACAAAATGTGCCTTTAATGTGTATTATAATCCCAGGGTTAACTCATCAGGATTCATAATACCCCTTCACAAATTCTTGAAGAGCCTTGATCATTCATATTTGGTTGGAATGAGGTTCAGGATGCGTGTTGAAACTGATGAAACTACAGAGAGAAGGTGCACTGGATTAATTGTTGGAATGAGTGATGTAGATCCTATTAAGTGGCCTGGATCAAAATGGAAATGCCTGCTGGTCAGGTGGGATGACATGGAAGCCCCTAGGCATAATAGGGTTTCCCCTTGGGAGATTGAACCATCTAGTTCTGTTCCCACTTCCAATAATTTCATGGCATCTAGTTTCAAGAGGAACAGGATTGGTCTGCCTTCGGAAAAGGCTAAATTACCAGTCCTGAATAGGATTGGAGGATCAGACTTTGGGGAATCATTGAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATATTGGGCATTAATACCCCATATGTTGGTATCAATGCTCAGAGTCACCAATTATCTGAAAGTAGGTGCTATCCTGGGTCAAACTGTTCCAGAATTGTAGCAGCAGGAAATAATGTCAGGGTCCCACAAGTGAGTTCTGACATGTCATGCCGTGGCATAGGCTTTAGTGAATCTTCACGATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATATAGAACCTTGTCTGTTAATGAGGCTCATAGAAATGGTTGCTTTGGAATCTTTGATGGTGGTCAATTGCTGGGGTCCAGAAATCAATGGTCTACCCAGATGCGGGACAATTCTTCCCATATGCATCCATCTGGACTGGTTTCATCCCCATCATCTGTTATGATGTTCCAACAAGCAGCCAATTCAGTTTCAAACTTTGATTATGGGAATAAAAGTAATCAAGAGATGGAGAGAAAAATGCACTACCTAGGTAGAAAGTTAGCACAATCCCCATCTAATGAGCCTGGTTCCTTTGGGCAAGTTCAGGAAGGAACAAATTCGTTTGGTACTTCAAATTTTCATAATCATCTGGTCAAAGCAAGTTCAGATGATTCTCTTTTGCGATTGGCTGGTAGTCGAGAGTTGGTTTCCACATGTAAAAGTAGCTGCAGACTCTTTGGTTTTTCATTAACCGAGGAAAATCATATTGCCCATGAAGAAGCAGGCTCCTCTACAATCACTTGTCAATTAAATTCTGGACCTTCCTTAATAAGACATGTTGGGGATGAACTTCAGCTAGGGCATTCACTCAGGAGCAAGGCAGTTGGAAGCAACAATACCAAAGGAGTCCTAAGGTATTGA 2193 0.4496 MQGLVPMGGLIDLNTTEDDETPSSLSSAASSSSSHSGVVTTTTTTSAPSSSNAAVCLELWHACAGPMISLPKKGSVVVYFPQGHMEQQLQDFAVDAFNINFPSHVFCHILDIKLHAEEGSDEVYCQVSLVPESEQVKPKLPEGELDADGEEEDADAVVKSTAPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLRGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQLKRGGTLSVPSAYQLNPSALMDVINALSTKCAFNVYYNPRVNSSGFIIPLHKFLKSLDHSYLVGMRFRMRVETDETTERRCTGLIVGMSDVDPIKWPGSKWKCLLVRWDDMEAPRHNRVSPWEIEPSSSVPTSNNFMASSFKRNRIGLPSEKAKLPVLNRIGGSDFGESLRFQKVLQGQEILGINTPYVGINAQSHQLSESRCYPGSNCSRIVAAGNNVRVPQVSSDMSCRGIGFSESSRFQKVLQGQEILPSQPYRTLSVNEAHRNGCFGIFDGGQLLGSRNQWSTQMRDNSSHMHPSGLVSSPSSVMMFQQAANSVSNFDYGNKSNQEMERKMHYLGRKLAQSPSNEPGSFGQVQEGTNSFGTSNFHNHLVKASSDDSLLRLAGSRELVSTCKSSCRLFGFSLTEENHIAHEEAGSSTITCQLNSGPSLIRHVGDELQLGHSLRSKAVGSNNTKGVLRY 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0756 730 ProSiteProfiles B3 DNA-binding domain profile. 166 268 IPR003340 GO:0003677
Lele35g0756 730 MobiDBLite consensus disorder prediction 11 49 - -
Lele35g0756 730 FunFam Auxin response factor 329 400 - -
Lele35g0756 730 Gene3D - 164 268 IPR015300 -
Lele35g0756 730 SMART B3_2 166 268 IPR003340 GO:0003677
Lele35g0756 730 MobiDBLite consensus disorder prediction 16 49 - -
Lele35g0756 730 Pfam Auxin response factor 293 373 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele35g0756 730 CDD B3_DNA 164 266 IPR003340 GO:0003677
Lele35g0756 730 SUPERFAMILY DNA-binding pseudobarrel domain 159 271 IPR015300 -
Lele35g0756 730 FunFam Auxin response factor 164 268 - -
Lele35g0756 730 Gene3D - 330 403 - -
Lele35g0756 730 Pfam B3 DNA binding domain 166 267 IPR003340 GO:0003677
Lele35g0756 730 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 54 684 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0756 Lele-ChrLele35 5938779 5946531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0756 51 695 B3 DNA Binding Superfamily AT5G60450 41.654 3.54e-146 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele35g0756 B3 9.2e-22 CL0405