Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0742 ATGGGAAGGGGGAAATTCAAGAGCAAGCCCACTGGTCGCCGCCAGTTCTCTACGCCCGAAGACATGGCTGCTGGTACATCTAACCGTCCACGGACTTTTAGAAAGAAAGAGGAAGAGGAGGAGGAAATTGATGAAGCGTCTGAGGAAGAAGAATCAGATGATGAAACTACACAAAAGACAAAAGGAACCCAAGGTATTATTGAGATTGAAAATCCTAATCTGGTAAAGCCAAAGAGCTTGAAAGCTAAAGATGTTGATGTTGGGAAAACAACTGAACTTTCAAGGCGAGAGAGAGAGGAGCTGGAGAAACAGAGAGCTCATGAACGCTATATGAGGTTGCAAGAGCAAGGAAAAACTGAACAAGCAAGGAAAGATTTAGAGCGTTTGACTCTTATACGTCAACAAAGGGAAGAAGCTGCCAAAAAGCGAGAGGAAGAAAAAGCTGCCAAAGAACAAAAGAAGTGTGCTCGCTCGGGGGAACTCGTCTCGCTGTCACCCAGCTGCGTCTCGCCTTCGGCCGTTCTCCGTTCAGGTGAGCTTCCCTCCGTTGGTCCGTCTGCTCCTCCTCTCGCCGTGCTGTCCCCGAAGCCTTGCCCTGCGGCAGTTCATCCCGTCGTCCTCCTTCGTAGCTGCCGCAGCCCATCCATCGTTCCCCAGGAAGTTAAATCAGCTCTGTCATCTCTTCTTGCGCTCTAAATTGAGCACCGTGGGCTTCCCTCCCATGAGGGTGAAATGACATCTAAATTATGGAGGGATGCTTGTAATGGAGCCACCATGTTTCTCTCATTCTCCCTTGTGAATACTTTTTCATTTGCTATTAGTTCAAGATGGACTTCGTTGACAGTGTCAAACCAAGTTATCAGAACACTGCCTTCTTTTTCATTTTGCTATCATTCTTGGCCATTTCCAAGTGAAACTAATCAAACTAAGAAGTTTTCTTGCAACATTTCTGATTCAGAATTTCCACAGAAAGGCAAGCAACTTTTGAATGGTCTGATCATATGTTCCACTTTATCAAGCTGCCCATCTGATTTAATTTCTTTGAGCTTCTTTATGCGGTGTGCCCAACAACCCAATTACTTTCATGATGTGGCAGCATTTGATTGCATGGTTGATGTGGTTCGATGCCTCACTAAGCAGTATAAAACAGTCAAAGGAATTGTGCTGGAATTGGAGACTGTTGGGTGTATTATGAAGGCAAAAGTTTTTTTTGCTTTTATTGAGGATTTATTGGCATGGAGGAATATTGGAGAAACTGATAAAGCTTTGAAGGTTTTAAAAGAGACTCAGGCCCCAAACTTCTTGACCTTTAATATTGCATTGCTTTATCTTTCTAAGTTAAATGATGTTGATCTTATTAGTCATGTCTTTAAAGTTATGTTAAGGATGCGGTATTATCCTAATGCTAGGACATTTGAGATACTTCTCAATTGTTTTTGCAAGATGAATAGGTTTGCAGAAGCATATCAAGTTTTGGGTCTTATGATCTCTTTTGGGATCACAATGTCCTCGAAAGTTTGGACTATACTTATCAACGGATTTTGTAAGCAGTATAGACTTGTTCTCGCCAGCAATCTGTTGAAGAAGATGAATGATTCTGATTGTTCTCCGAATGTTGTGGCATATACCACTTTGTTCAAGGCATTTATGGAATCCAAAATGATTGCTGATGCTTTTGGGTTGTTAGATACCATGATTTCAAGAGGCCAAAATCCTGATATAATTCTTTATAATGTCCAAATTGATTGCCTTTCAAAGGCTGGAATGTACCAAGATGCTATTAATGTTTTTTTAAGTTTGTCCGAACAAAATATAGCACCTGATTCTTATACTTTTAGCTCATTGTTGTCTACAATATGCCTTTCTAGAAAGTTTAATCCTTTATCCAAACTAGTTCATGGACATATCGCAGATGCTGATCTAATACTATGCAATGCACTTCTAAATTATTTCTGTAAGGCTGGGTCTCCATCTCTTGCTGTGGAGTTATACAATGATATGATCGATAGAGGGTTTTCCCCGGACAGGTATACTTTTTCTGCATTACTTAGTGGACTTTGTGGTGCAAGAAGAATTGATGGAGCATTAAATGTGTATCGTGGTATTGTTATGACTTGTAATGATGTTGATGCTCACTTCCATACCGTGTTAATAGATGGGCTTGTCAAAATTGGTACATATCACACGGCTATTAAAATGTTCAAAAATTCAATAAAGGAGAAATGTCCACTTAACAGTGTATCATATACAGTTGATATGTGTGGACTTCTTAGAGGTGGAATAACTCTAGAGGCATGTACATTGTATGACAGAGTGAAGGGCAATGGTCTGACACCTAATGTTCTTACATGCAATATGATGTTGTCAGCCTTTTGTAAAGAAAAAGGTCGTGAAATGGTCAATTGGATGCTACAAGAGATGATTGATTTGAGGATAGAGCTTAGGGACAGAAGTTTCTTAAACTTATGGAAATATTTAAGTGTTTCGAACACTTATCTTTCATCTTTTAAGTTGTTGGCTGAGACGGTAGTCTTGGGCTTAATACCTGCCAAGGCGTTGCATGATTTATGCTTTGTTGGGCATGCTAAAGCAAATTACGAATACCATAGAGAAGCGTTTACAGACTGTAACATGGCCCTAGATTCATCCAGTTCTGAAGATCTCTGCGATTTGAGTGCTGCAGTTTGATTGTACTTATTTGATCCAAGAAGATGGAAGTCTAAGATTGAAGGTGCATGTTTTATTGGAAGTCTGAGATTCAAACATGCATCAATGCATGAAGTTCTATGCTTCTGGGTTATATGAGATCAATACCAGAATACAGCTTTACGTCACCCTCTTCCTCTGGGCTGTTTATCATCATCTCTGGTCACCTCCTGTAGCTCAAGCTTGTCATCTTTGTTTGTCTCTGCCGACCTGATGCCTAAAGTTATGGAGCAACGAAACACAGTGATTCTTCTGCTTCTGCTTCTGTTCCAAGTTCTCGTTGTAGCCGCACAGAACTCAAATCGAGACTTAACTGCTTTTTCATCTCTCACTGAATTTTGGGAAAATAAGCCACCAAGTTGGGTGGGCGCAGATCCTTGTGGCGGTACTTGGGACGGAATTGAATGTGACAATTCAAGAGTGATCTCAATAAAATTGTCAGGCATGAACATTAAAGGCAGCTTGACGGAGGCTATTGGGAGATTGACTGGATTAAAGATTTTGGATCTCTCTTTCAACAAAGACATGGGTGGAAGAATTCCAGATGAAATTGGGAAATTGAGAAAATTACAAACCTTGTCATTGGTTAATTGTGATTTCTCTGGTCCTATTCCTGAATCAATAGGAGCTCTTAAGCAGTTGACCTTTTTAGCCCTTAATCTTAACCGGTTGAGCGGGAATATCCCACGTACGTTTGGCAATCTATCCAATGTTAATTGGCTAGATATTGCAGACAACCAGATTGAAGGACCTATCCCTGTCTCCGATGAAGAAGGACCTGGTCTTGACATGCTTCACAAAACAGAGCACTTTCACTTTGGAAACAACCGCCTCTCAGGTCAAGTTCAAGCTAAGCTTTTCAGCTCAAATATGATACTGAAACACCTGCTTCTTGACAACAATAAGCTAGAGGGCAGCATTCCAGACACTGTTGGATTAGTGAAGACATTGTCGGTGGTACGCTTTGATCACAATCAAATGAGTGGAGAAGTGCCTTCAAGTATCACAAATCTCACAAAACTCACTGATCTGATTTTAAGCAACAATAATCTAAATGGCTCTATACCCGATCTTACTGGATTAAATACACTCTCCTCTGTGGATTTGAGCAACAACTCTTTTAATCCTTCCAGTATCCCTTCATGGGCTTCGAGTTTTCCATATTTAACTATATTATCATTGGAAAAGACTGGACTGCAAGGGGAAATACCTGACACTTTATTTAGCCAGTCTAATATAGAGACTGTGATACTGAGGAATAATCAGCTCAATGGTACCCTGGATGTTGGCAACTATAAATCCAATTTGGATCTTATTGATTTGAAGAATAATAAGATAACTGACTTTGCTCAGAAAAGTGAAAAAATCAGTTTTGAAGTCATACTAGTTGGAAACACCATTTGTCTTGAAACAGGAGCTGATTCACAAAGTTACTGCAAAAACTCACAACCTAGGAGCACATATTCAACAACACCAAATAAATGTGTACCTCTTCTTTGTAGTTCTAACATGGTTTCCAGCCCAAGCTGCAAATGTGCAATGCCCATAACAGGAGTTCTGATTTCTAGAGCTGTTGGTTTCTCAAACTTTGGAAACACAAGTTATTTCAAGGATCTTGAGCTGGGCCTGTTGACTACTTTCCAGTCCCATTACCTGCCAGTGGATTCAGTTTCTCTGAGCAACCCACACAATAACCCTTCTATTAGTTATTTTAGTTTGGACCTTCAAGTCTTCCCATCTCAAAGTGACCGTTTCAACAGAACTGGAGTTTTAAGCATTTTATTCGCGCTCTCCAACCAGCTCTATAAAGCTCCAGAATTTTTCAGCCCATACTATTTTTCTAGCAATCATAGCTATGCATTCTTTGCAGAAGAGTCTTCATCAGGTAAAACAAGTACAGGGGTTATAGCTGGTGCAGTTGCTGCTGGTGTCGTCGTTTTGGTACTGTCCATCGTTGTAGTAATATTTGCAATCCGCCAGAAGAAAAGAGGAAAGGAGTTTAATCCTTTTGCAAACTGGGAACAGCACAATAATAGTGGCAATGCTCCTCAGCTAAAAGGAGCACGTTGGTTTTCTTTTGAAGAGCTCAAGAAATACAGCAACAACTTTTGTGATGCCAATACTATTGGAGCTGGGGGCTATGGAAAGGTCTACCAAGTTGTTCTTCCCTCTGGGGAACCGGTTGCCATCAAGCGTGCTTCACAAGAATCTATACAAGGGGCTGTTGAGTTCAAAACTGAGATTGAGCTTCTATCAAGGGTCCATCACAAGAATCTTGTTGGTCTTGTAGGTTTCTGTTATGATAAAGGTGAACAAATGCTGGTGTATGAGTATATTCCTAATGGCACTATAATGGACAGTCTTTCAGGAAAATCTGGAATTAGAATGAACTGGATAAGGAGGCTAAAAGTTGCTGTGGGAGCTGCCAGAGGGCTAGCCTATCTTCATGAACTTGCTGACCCACCAATCATACACAGGGACATAAAATCAAGTAATATCCTGCTCGATGACCACCTAAATGCGAAAGTCGGTGATTTCGGTCTCTCCAAACTCAAGGATAGTGACAGGGGCCATATCACAACTCAAGTCAAAGGAACAATGGGATATTTGGATCCTGAATACTATATGACTCAACAGTTATCAGAAAAGAGTGATGTTTATAGCTTTGGAATTACGATGCTTGAACTGGTAACAGCAAAGAAGCCAATAGAGCAAGGAAAATTCATTGTAAGAGAGGTTCTAAGGGTAATGGATAGATCAAAAGAGTTATACAATCTTCATGCCATGATAGACCCAATGATAAAGCAAGATGGAAACCCAAAAGGTGTAGAGAAGTTTGTGGACTTAGCATTGAAGTGTGTCAAAGATCATGCAGAAGAGAGGCCAACAATGGCTGAAGTTGTGAAAGAGATTGAGAATATAATGCAACTTGCTGGTTTCAACCCCAATGCTGAATCAACATCAACATCAGAATCTTATGATTATGCCAGTGGTGGGAAAGTCTACCATCCTTATGTTGATGAAGATTTCGCCTACACTGGCGTTTTCCCATCAGTAAAGGTTATACAATTCACGACCACCATGTCTGACACTGACCCCAAAAGCCATTCCTCTTCACCTGCTCCTCCTCCTTCTTCGTCTTCTTCAAGTGAAATCAGAAGTGGCCATTCCAACAATCACGGCTCCAACCAATTCTCAGGCCACAAGGCTCATTATCCGAACCCACCTGACGCTGTGAATCCGGACGCTGCTACTCTCAGAGATCAATGGAGGTATGCTATTAAACAATACAGTAGATGGTATTCTCACGCTTGGGGCACTGCAATTCTAGCTGGCGTTGCCTTCTTTACCCTTGGATGGGTCATCAAAGGCGGGAATCCCTTACCCTCTTACCGCGCTGAGGAATCTTCGCCCACATCTTCACCTGATTCGGAGAAACCTCGCCTGTAA 6156 0.411 MGRGKFKSKPTGRRQFSTPEDMAAGTSNRPRTFRKKEEEEEEIDEASEEEESDDETTQKTKGTQGIIEIENPNLVKPKSLKAKDVDVGKTTELSRREREELEKQRAHERYMRLQEQGKTEQARKDLERLTLIRQQREEAAKKREEEKAAKEQKKCARSGELVSLSPSCVSPSAVLRSGELPSVGPSAPPLAVLSPKPCPAAVHPVVLLRSCRSPSIVPQEVKSALSSLLALXIEHRGLPSHEGEMTSKLWRDACNGATMFLSFSLVNTFSFAISSRWTSLTVSNQVIRTLPSFSFCYHSWPFPSETNQTKKFSCNISDSEFPQKGKQLLNGLIICSTLSSCPSDLISLSFFMRCAQQPNYFHDVAAFDCMVDVVRCLTKQYKTVKGIVLELETVGCIMKAKVFFAFIEDLLAWRNIGETDKALKVLKETQAPNFLTFNIALLYLSKLNDVDLISHVFKVMLRMRYYPNARTFEILLNCFCKMNRFAEAYQVLGLMISFGITMSSKVWTILINGFCKQYRLVLASNLLKKMNDSDCSPNVVAYTTLFKAFMESKMIADAFGLLDTMISRGQNPDIILYNVQIDCLSKAGMYQDAINVFLSLSEQNIAPDSYTFSSLLSTICLSRKFNPLSKLVHGHIADADLILCNALLNYFCKAGSPSLAVELYNDMIDRGFSPDRYTFSALLSGLCGARRIDGALNVYRGIVMTCNDVDAHFHTVLIDGLVKIGTYHTAIKMFKNSIKEKCPLNSVSYTVDMCGLLRGGITLEACTLYDRVKGNGLTPNVLTCNMMLSAFCKEKGREMVNWMLQEMIDLRIELRDRSFLNLWKYLSVSNTYLSSFKLLAETVVLGLIPAKALHDLCFVGHAKANYEYHREAFTDCNMALDSSSSEDLCDLSAAVXLYLFDPRRWKSKIEGACFIGSLRFKHASMHEVLCFWVIXDQYQNTALRHPLPLGCLSSSLVTSCSSSLSSLFVSADLMPKVMEQRNTVILLLLLLFQVLVVAAQNSNRDLTAFSSLTEFWENKPPSWVGADPCGGTWDGIECDNSRVISIKLSGMNIKGSLTEAIGRLTGLKILDLSFNKDMGGRIPDEIGKLRKLQTLSLVNCDFSGPIPESIGALKQLTFLALNLNRLSGNIPRTFGNLSNVNWLDIADNQIEGPIPVSDEEGPGLDMLHKTEHFHFGNNRLSGQVQAKLFSSNMILKHLLLDNNKLEGSIPDTVGLVKTLSVVRFDHNQMSGEVPSSITNLTKLTDLILSNNNLNGSIPDLTGLNTLSSVDLSNNSFNPSSIPSWASSFPYLTILSLEKTGLQGEIPDTLFSQSNIETVILRNNQLNGTLDVGNYKSNLDLIDLKNNKITDFAQKSEKISFEVILVGNTICLETGADSQSYCKNSQPRSTYSTTPNKCVPLLCSSNMVSSPSCKCAMPITGVLISRAVGFSNFGNTSYFKDLELGLLTTFQSHYLPVDSVSLSNPHNNPSISYFSLDLQVFPSQSDRFNRTGVLSILFALSNQLYKAPEFFSPYYFSSNHSYAFFAEESSSGKTSTGVIAGAVAAGVVVLVLSIVVVIFAIRQKKRGKEFNPFANWEQHNNSGNAPQLKGARWFSFEELKKYSNNFCDANTIGAGGYGKVYQVVLPSGEPVAIKRASQESIQGAVEFKTEIELLSRVHHKNLVGLVGFCYDKGEQMLVYEYIPNGTIMDSLSGKSGIRMNWIRRLKVAVGAARGLAYLHELADPPIIHRDIKSSNILLDDHLNAKVGDFGLSKLKDSDRGHITTQVKGTMGYLDPEYYMTQQLSEKSDVYSFGITMLELVTAKKPIEQGKFIVREVLRVMDRSKELYNLHAMIDPMIKQDGNPKGVEKFVDLALKCVKDHAEERPTMAEVVKEIENIMQLAGFNPNAESTSTSESYDYASGGKVYHPYVDEDFAYTGVFPSVKVIQFTTTMSDTDPKSHSSSPAPPPSSSSSSEIRSGHSNNHGSNQFSGHKAHYPNPPDAVNPDAATLRDQWRYAIKQYSRWYSHAWGTAILAGVAFFTLGWVIKGGNPLPSYRAEESSPTSSPDSEKPRL 2051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0742 2051 Gene3D Tetratricopeptide repeat domain 520 630 IPR011990 GO:0005515
Lele35g0742 2051 Gene3D Tetratricopeptide repeat domain 707 815 IPR011990 GO:0005515
Lele35g0742 2051 Gene3D Tetratricopeptide repeat domain 397 519 IPR011990 GO:0005515
Lele35g0742 2051 Gene3D Tetratricopeptide repeat domain 631 706 IPR011990 GO:0005515
Lele35g0742 2051 MobiDBLite consensus disorder prediction 1929 1971 - -
Lele35g0742 2051 MobiDBLite consensus disorder prediction 11 25 - -
Lele35g0742 2051 Coils Coil 29 56 - -
Lele35g0742 2051 MobiDBLite consensus disorder prediction 77 115 - -
Lele35g0742 2051 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 503 537 IPR002885 -
Lele35g0742 2051 ProSiteProfiles Protein kinase domain profile. 1605 1877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0742 2051 CDD STKc_IRAK 1611 1876 - -
Lele35g0742 2051 FunFam Leucine-rich repeat protein kinase family protein 1160 1259 - -
Lele35g0742 2051 Coils Coil 96 116 - -
Lele35g0742 2051 FunFam Leucine-rich repeat family protein 1004 1159 - -
Lele35g0742 2051 SUPERFAMILY Protein kinase-like (PK-like) 1588 1886 IPR011009 -
Lele35g0742 2051 Pfam PPR repeat family 505 549 IPR002885 -
Lele35g0742 2051 Pfam PPR repeat family 640 687 IPR002885 -
Lele35g0742 2051 Pfam PPR repeat family 572 620 IPR002885 -
Lele35g0742 2051 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 640 674 IPR002885 -
Lele35g0742 2051 Gene3D Ribonuclease Inhibitor 1000 1160 IPR032675 -
Lele35g0742 2051 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 573 607 IPR002885 -
Lele35g0742 2051 Gene3D Transferase(Phosphotransferase) domain 1 1681 1896 - -
Lele35g0742 2051 TIGRFAM PPR: pentatricopeptide repeat domain 471 502 IPR002885 -
Lele35g0742 2051 TIGRFAM PPR: pentatricopeptide repeat domain 540 573 IPR002885 -
Lele35g0742 2051 TIGRFAM PPR: pentatricopeptide repeat domain 643 675 IPR002885 -
Lele35g0742 2051 TIGRFAM PPR: pentatricopeptide repeat domain 506 539 IPR002885 -
Lele35g0742 2051 TIGRFAM PPR: pentatricopeptide repeat domain 576 609 IPR002885 -
Lele35g0742 2051 Pfam Protein kinase domain 1608 1871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0742 2051 MobiDBLite consensus disorder prediction 1929 1984 - -
Lele35g0742 2051 Gene3D Ribonuclease Inhibitor 1161 1369 IPR032675 -
Lele35g0742 2051 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1725 1737 IPR008271 GO:0004672|GO:0006468
Lele35g0742 2051 Pfam Casein kinase substrate phosphoprotein PP28 71 148 IPR019380 -
Lele35g0742 2051 Coils Coil 129 156 - -
Lele35g0742 2051 ProSitePatterns Protein kinases ATP-binding region signature. 1611 1633 IPR017441 GO:0005524
Lele35g0742 2051 FunFam receptor-like protein kinase FERONIA 1572 1680 - -
Lele35g0742 2051 Pfam PPR repeat 466 495 IPR002885 -
Lele35g0742 2051 MobiDBLite consensus disorder prediction 2029 2051 - -
Lele35g0742 2051 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 1681 1890 - -
Lele35g0742 2051 PANTHER RECEPTOR-LIKE PROTEIN 55 1012 1876 - -
Lele35g0742 2051 Gene3D Phosphorylase Kinase; domain 1 1575 1680 - -
Lele35g0742 2051 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 468 502 IPR002885 -
Lele35g0742 2051 MobiDBLite consensus disorder prediction 1 115 - -
Lele35g0742 2051 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 538 572 IPR002885 -
Lele35g0742 2051 SUPERFAMILY L domain-like 1021 1353 - -
Lele35g0742 2051 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 780 814 IPR002885 -
Lele35g0742 2051 SMART serkin_6 1605 1882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0742 2051 ProSiteProfiles Leucine-rich repeat profile. 1242 1264 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0742 Lele-ChrLele35 5729055 5756092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0742 985 1923 Receptor kinase-like Gene Family AT5G49760 51.637 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele35g0742 Pkinase 6.8e-47 CL0016