Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0738 ATGGCGTCATCGTCTTCCCAAACAGAGCTTCTTCCTCTTAACCAGGATGATTCTCAAGACATGGTCATCTACCATGTCCTCTCCGAAGCCAACGCTCTTCCACCTTCTTCTTCTGCACCAGTCCTTGGCCTCCATCAGGTCACCACCAGGACCGTCAAGAAGCACTATCGGGGCGTGAGGCGGCGCCCATGGGGAAAGTACGCAGCGGAGATCCGGGACTCGGCTCGCCAAGGGGCTAGGGTTTGGCTGGGGACGTTTGAGACCGCAGAAGAGGCCGCCTTGGCTTATGACAGAGCTGCTTTCAGAATGAGAGGTTCTAAGGCTCTTCTTAATTTCCCACCTGACCTTGTAGCTCCTCCTTCTCCTTCTATTTCAAGCCCAGAAAGATTGAATAACAAGGCTTCTTCTGATTCTGATTCAAGTGCTGTAAGTTCTGTTGAGAGTCGTAGTTGA 453 0.521 MASSSSQTELLPLNQDDSQDMVIYHVLSEANALPPSSSAPVLGLHQVTTRTVKKHYRGVRRRPWGKYAAEIRDSARQGARVWLGTFETAEEAALAYDRAAFRMRGSKALLNFPPDLVAPPSPSISSPERLNNKASSDSDSSAVSSVESRS 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0738 150 CDD AP2 54 115 IPR001471 GO:0003700|GO:0006355
Lele35g0738 150 Gene3D AP2/ERF domain 54 114 IPR036955 GO:0003700|GO:0006355
Lele35g0738 150 Pfam AP2 domain 55 105 IPR001471 GO:0003700|GO:0006355
Lele35g0738 150 MobiDBLite consensus disorder prediction 116 150 - -
Lele35g0738 150 ProSiteProfiles AP2/ERF domain profile. 55 113 IPR001471 GO:0003700|GO:0006355
Lele35g0738 150 SUPERFAMILY DNA-binding domain 55 114 IPR016177 GO:0003677
Lele35g0738 150 FunFam Ethylene-responsive transcription factor 2 54 114 - -
Lele35g0738 150 PRINTS Ethylene responsive element binding protein signature 79 95 IPR001471 GO:0003700|GO:0006355
Lele35g0738 150 PRINTS Ethylene responsive element binding protein signature 56 67 IPR001471 GO:0003700|GO:0006355
Lele35g0738 150 SMART rav1_2 55 119 IPR001471 GO:0003700|GO:0006355
Lele35g0738 150 PANTHER DNA-BINDING DOMAIN 49 135 IPR044808 GO:0003700|GO:0009873
Lele35g0738 150 MobiDBLite consensus disorder prediction 124 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0738 Lele-ChrLele35 5692285 5692737 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0738 11 139 AP2-EREBP Transcription Factor Family AT3G23240 47.297 1.75e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele35g0738 AP2 7.5e-16 CL0081