Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0737 ATGGCAACAACTCATAGTGATCATCAAGCAAAACCGAGCTACGGTTTCGTGGTAATGGAGGAGTCATCATCGGAGTCCAAGGATCCAAATTCGAATTACCAGATTAACCAGAAGATTAGTCATCATCATCATGCAGCTGCAGATTCAGAAGCGATTCTTGAGAACATATGGGCTAGAGTTATAAGCAGTAATAATGGTGGAATAACAAGAGAAAATGCATGGGAAGGGCTTCCAAATCTTGAAGGAAGAGACAAATCTATGGAGATTCTACAAAGGCTTCCAAGTTTGGGAAGATGGATATCAATGGGAGCTGAGGCATGGGAAGAGATTTTAGCTGATTTTCCACAAAACCTTCTTCTTCAAGACAATCTGGGAATTTGCAGGAACATTCATGAATCCAACTGTAAAAAGGTAGAACAACAAGAAGAGAAAGAAGAAGGTGGCGGTAGCGTTGTGAGGGCAAAGAATAATAATAAGGAAGGTAAAAGTAGAAGACACTACAGAGGAGTGAGAAGAAGGCCATGGGGGAAATATGCAGCAGAAATAAGGGACTCATCAAGAAATGGAGCCAGGGTTTGGCTTGGGACATTTGAGACAGCTGAAGAAGCTGCTTTAGCTTATGATAAAGCAGCTTTGAGAATTAGAGGTCCTAAGGCTTACTTGAATTTCCCAATTGAAACTGTTGCGAATGCTTTAGGGTTTGACCTCAAGGCTTCTTCTTCAACTAATTGTGAGGAGGATTATTCTGAAAGTTGCATCAATAATTCCAGGAAAAGAAGATTGAGAAATATTATTGAAAAACCTGAAGCTAAAAAGATGGCGACTTTGGGGAATGAAGTAGATGTTGTTGTGTTTCAGGACTTGGGGAATGATTACTTGGAGAGTTTGTTATCTTCCTTTTGA 903 0.402 MATTHSDHQAKPSYGFVVMEESSSESKDPNSNYQINQKISHHHHAAADSEAILENIWARVISSNNGGITRENAWEGLPNLEGRDKSMEILQRLPSLGRWISMGAEAWEEILADFPQNLLLQDNLGICRNIHESNCKKVEQQEEKEEGGGSVVRAKNNNKEGKSRRHYRGVRRRPWGKYAAEIRDSSRNGARVWLGTFETAEEAALAYDKAALRIRGPKAYLNFPIETVANALGFDLKASSSTNCEEDYSESCINNSRKRRLRNIIEKPEAKKMATLGNEVDVVVFQDLGNDYLESLLSSF 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0737 300 PANTHER DNA-BINDING DOMAIN 139 295 IPR044808 GO:0003700|GO:0009873
Lele35g0737 300 CDD AP2 174 225 IPR001471 GO:0003700|GO:0006355
Lele35g0737 300 MobiDBLite consensus disorder prediction 138 167 - -
Lele35g0737 300 PRINTS Ethylene responsive element binding protein signature 190 206 IPR001471 GO:0003700|GO:0006355
Lele35g0737 300 PRINTS Ethylene responsive element binding protein signature 167 178 IPR001471 GO:0003700|GO:0006355
Lele35g0737 300 MobiDBLite consensus disorder prediction 1 32 - -
Lele35g0737 300 Pfam AP2 domain 166 216 IPR001471 GO:0003700|GO:0006355
Lele35g0737 300 SUPERFAMILY DNA-binding domain 166 226 IPR016177 GO:0003677
Lele35g0737 300 SMART rav1_2 166 230 IPR001471 GO:0003700|GO:0006355
Lele35g0737 300 ProSiteProfiles AP2/ERF domain profile. 166 224 IPR001471 GO:0003700|GO:0006355
Lele35g0737 300 FunFam Ethylene-responsive transcription factor 2 165 226 - -
Lele35g0737 300 Gene3D AP2/ERF domain 165 226 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0737 Lele-ChrLele35 5687726 5688628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0737 162 299 AP2-EREBP Transcription Factor Family AT3G23240 50.355 7.53e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele35g0737 AP2 2.7e-15 CL0081