Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0726 ATGACCCAGTCAAAGATACTAATTTTCAAGCATTATTCCCTGAAGATTCATCGTCACTTCGTAATTAGTTTGACTTCTAAGAAGGCTTTGAAATGTCTTTCAAAAAGAAAACGGAAGAAGGCTTTGACTTTATCTCTTTCAACTTTTGCAAGAAACAAGACTGATTATCGAAGCCTTTTGCTAATTCTTTTTGCTGCCTTCAGTTCCATTATTCTCCTTCCCAGATGCTCCCAAGGAGCTGCAGCAGATAACAGTAATAATGGAATCAATATTGATGTTGGTGCAATTCTTGACGTCAATTCTCAAGTTGGAAGACAACAGAAAGCAGCCATGGAAATTGCAGCCAAAAGCTTCAACAGCTATCCAAACAGCCTCAACATATCCCTACATATTCGTGATTCTCTAAGCAATCCATTGCAGGCAGCTTCTGCTGCTCAAGAGCTAATAAATAAAAAGAAAGTTGAGGTTATCATTGGAATGGAAACATGGAAGGAAGCAGCTTTTGTAGCTGAACTTGGAGATAAAGCTCAAGTTCCAGTAATTTCATTCTCATCTCCTTCAATATCCTCACAATCATCATCAATCCAATTTCGTTGGCCTTTTCTGATTCAAATGGCCAAAAGCCAGACTTCAAATATGAACTGCACAGCTGATATTGTTCATGCATATGGCTGGCAAAAGGTTATAGCCATATACGAAGATGATTCTTACAGTACATATTCTTCAGGCATGTTAACTCTTCTTTCTGAAGCCCTCTTGAAGACTAACTCTCAAATTGAACGAAGAATTGTTCTCCCACCATTTTCTTCTTCATCTGATCCAAAAGCTTTTGTTCTTAATGAACTGATTGAGCTATTATTATCAGCACAATCTAGGGTTTTCATTGTTATCAAAGCTTCATTGCCTATGGTTACCCATTTGTTTAGAGAAGCTAAGAGATTAGGGTTCTTAGGTAAAGATTCAGCTTGGATTATTAATGAGGATATTGCTAACATGCTTGACTCAGTCAACGATGAAACTGTCTTATCCTCCATGGAAGGATTGTATGCTCTGCAAGCTTATGATAGCATCACGGTTGTCACAAAAGCCCTAGAGAAGATGAATGGTGCTAATAAGAACAACTCGAGAGTCTTCATGGAGAAAATGCTGGCTAGTAACTTCACTGGTTTAACTGGTAACATAGGGTTCAAGGAAGGCCATTTATATTCAGAGACTCCATTGTTAAGAGTGATAAACGTGGTGAACAAGAACTTCACAGAATTGGACTTCTGGGTACCAAATTTGAAGTTCTTTAAATCTCTGGAAGACATAGAGAAAGGAAATAATGATGGTTCTAGATATAATCTAAGTGGTCCTTTGGTTTGGCCTGGAGGTTTAAAGACTGGTATAAACAATAATGATGATGATTTTCCATTAGGATGGAACATACCTTCGGACGTGAAACCTTTGAACGTAGCAGTTCCTGTAAATCCTGCTTTCGAGAATTTTGTGAAGGAAGAATCTCCTGGGAAATATGTTGGTCTGTGTATTGAACTTTTTGAGAAGATTCAAGAACAGCTTAAACATAAGTACTCTGGGGGTAAAGTGTATAGTAACTCAGGAAGAGTGGTGATTGCTGTATGGCTATTTGTGGTGTTCGTTCTGACTTCAAGCTACACTGCAAATCTTTCTTCTATGCTCACTGTGAAACGCATGAAGACTGGCAGAAATTTTCAGTGGCTGAAGGAGAATAAGTTAAAAGTTGGGTGTGATAATAGCAGTGAATTTGTGAAGAACTACTTGCTTCATGTCTACGATATACCTAAAGAGCAGATCTTAAGTCTTGATGGTGAACCTGACTTTGTGGACAAGTTTAAGAGGAAAAAAATTTCTGCTCTTGTCCTTGAGAGCCCTTATGAAAAGGTTTTCTTAAGCAAGTATTGTGACCGATACACTGCAACTCGTGCCGGCTATAAATTCGGAGGCCTCGGCTTTGTATTCCAAAGAGACTCTCCGTTGGTGAAAGATTTTTCTGAAGGTATTTTGAGGTTAGCAGAGAATGGAACCCTAGAGAGGTTGGAAGAAAAATGGTTGACTCGTTCCAATAACTGCTCAAGCGACTCAATGTCGTCTTCTGAAACTGAAAGCCTAACCATCGCCGACTTTTGGATTCTGTATGTGATAAGTGGTCTCACTTCCACCATCTTCTTGATCGTTACTCTGTTGAGGACTCACCTTCATCAACAGAAAGAAGATGATCCTCAAGACAATAATAATAATATAGAAGCTTCTGATAATAATGGAATTGTTTGGAACAAGGCACTCGGGAGACTCACTTCAGGGCTTTACAACAATATTGGGAGCTTCAATTTCAACACTATAGGAAGAGCTGCAACCTTTGGTGGAACAGAAACTGTTGGCCATTGGAATTCTTCAAGGTGGGAGAGTGTAAGAACTTCTGATGATTATGTTAATCCTCGACGGACCCAATCAGTTGGTTTAGAAATGTTATAG 2493 0.3891 MTQSKILIFKHYSLKIHRHFVISLTSKKALKCLSKRKRKKALTLSLSTFARNKTDYRSLLLILFAAFSSIILLPRCSQGAAADNSNNGINIDVGAILDVNSQVGRQQKAAMEIAAKSFNSYPNSLNISLHIRDSLSNPLQAASAAQELINKKKVEVIIGMETWKEAAFVAELGDKAQVPVISFSSPSISSQSSSIQFRWPFLIQMAKSQTSNMNCTADIVHAYGWQKVIAIYEDDSYSTYSSGMLTLLSEALLKTNSQIERRIVLPPFSSSSDPKAFVLNELIELLLSAQSRVFIVIKASLPMVTHLFREAKRLGFLGKDSAWIINEDIANMLDSVNDETVLSSMEGLYALQAYDSITVVTKALEKMNGANKNNSRVFMEKMLASNFTGLTGNIGFKEGHLYSETPLLRVINVVNKNFTELDFWVPNLKFFKSLEDIEKGNNDGSRYNLSGPLVWPGGLKTGINNNDDDFPLGWNIPSDVKPLNVAVPVNPAFENFVKEESPGKYVGLCIELFEKIQEQLKHKYSGGKVYSNSGRVVIAVWLFVVFVLTSSYTANLSSMLTVKRMKTGRNFQWLKENKLKVGCDNSSEFVKNYLLHVYDIPKEQILSLDGEPDFVDKFKRKKISALVLESPYEKVFLSKYCDRYTATRAGYKFGGLGFVFQRDSPLVKDFSEGILRLAENGTLERLEEKWLTRSNNCSSDSMSSSETESLTIADFWILYVISGLTSTIFLIVTLLRTHLHQQKEDDPQDNNNNIEASDNNGIVWNKALGRLTSGLYNNIGSFNFNTIGRAATFGGTETVGHWNSSRWESVRTSDDYVNPRRTQSVGLEML 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0726 830 FunFam Glutamate receptor 212 383 - -
Lele35g0726 830 Pfam Ligand-gated ion channel 528 723 IPR001320 GO:0015276|GO:0016020
Lele35g0726 830 Gene3D - 320 401 - -
Lele35g0726 830 SMART GluR_14 484 693 IPR001320 GO:0015276|GO:0016020
Lele35g0726 830 SUPERFAMILY Periplasmic binding protein-like I 90 425 IPR028082 -
Lele35g0726 830 Pfam Receptor family ligand binding region 107 339 IPR001828 -
Lele35g0726 830 Gene3D - 479 696 - -
Lele35g0726 830 Gene3D - 520 590 - -
Lele35g0726 830 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 530 750 - -
Lele35g0726 830 SUPERFAMILY Periplasmic binding protein-like II 482 697 - -
Lele35g0726 830 Pfam Bacterial extracellular solute-binding proteins, family 3 549 692 IPR001638 -
Lele35g0726 830 Gene3D - 90 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0726 Lele-ChrLele35 5592111 5597433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0726 528 756 Ion Channels AT2G29120 33.043 5.50e-25 109