Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0690 ATGAAATGCATGTGGACCTGTACTGTGGAAACAAAGACAATGAAAAGCGTTAATGAACCAGAAATTCGATTCCCCTTTAGGCTCAAAGGAAAACACCCAGAATGGTGTTCATATGATTCAAGCTTTGATCTTTACTGTTCTGAATCAAACCGGACAGTTCTCGAGCTTCCTTTATCTGTCAAGGTTATCGTACAAAGCATAGACTGCGATAAACAAGTCTTCGCTGTGTCTGACCCTGATGGATGCTTTGCTCATCTCAACTTAGCTGCATCTCCTTTTCTGTCAAATGATTATTATGAATCCAGCAGCTATGCGTTATTCAATTGCTCAGGGACGTCCCGAAGCGATTCATCTGATTGTCAACAATGGGGGGACTTTTCTTGCCTCGATGTTCCTGGCTACAAAGTTTTAGCCATACCATCTTATGAGAGAATCATGGAATATCCTCTTCTATCATGCAGAAGAATTCATGGTTATGTATAA 483 0.4079 MKCMWTCTVETKTMKSVNEPEIRFPFRLKGKHPEWCSYDSSFDLYCSESNRTVLELPLSVKVIVQSIDCDKQVFAVSDPDGCFAHLNLAASPFLSNDYYESSSYALFNCSGTSRSDSSDCQQWGDFSCLDVPGYKVLAIPSYERIMEYPLLSCRRIHGYV 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0690 160 Pfam Wall-associated receptor kinase galacturonan-binding 19 78 IPR025287 GO:0030247
Lele35g0690 160 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 14 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0690 Lele-ChrLele35 4998334 4999095 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0690 23 109 C3H Transcription Factor Family AT2G25410 37.363 1.54e-09 53.5