Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0654 ATGGGGGTTAGATGGAACCAATTTGGATTATGGTTCAAAATATATATTTCCTTGATTTCTTTGTGGGAATTTCAAGTGTGTTGGTCTCTGAACAACGAAGGGTTAGCCTTGTTGGAGTTTCAAGGTAGAATAACATTTGATCCTTATGGAGCTTTGATGAATTGGAATCCAAACGATGGTAGCCCTTGCAAGTGGTTGGGTGTTCATTGCATTGACAGTAAAGTTCAAATTCTTGACTTAAACTCCTTATCTTTGGAAGGGACATTAAGTCCAGAGCTTAGAAAACTTAGTCACTTAAAATCTCTTGTGTTGTGCAAGAATAATTTCTCTGGACCTATTCCTAAGGAACTTGGAGGTTTAGCCAAATTGGAGTTATTGGATTTAAGGGACAATAAGTTTACTGGAAGTATTCCAGGGGAAATTAGCAGCTTATCAGAACTAAAACACTTGTTGCTTTGTGGCAATAAAATTGAAGTCAATGTTTGCCAAGGCGTTGAAAAGCCTAAAGTACCCTCTAAATGGTTATTCGTCGACAAGTGTACTTCACCTATAACTTCTGCTTTTGGTGGCTTGAATAGAAAATTTGGAAATGGGTTGAAGCTAGATAAACCTATTGATTTTTGTCAAGTGAATTTCTATCACAATCAACATGATTTTCACGAGCCTGGGATTGCCCAAACTATGCCAAACCTCGTCAATTCTGCACGTCGCAAGTTACTTGAACAATCCAGTAACCTTGCAGCTGCACCTGTCAGTGTTAGTCGTACTAAACCTATTGTTTCTCTTCCAACAAGCTTCAGTAGTGGAGCTTTTCCAGCTGTGTCAAATGCCAAGCAACAAAATCTATCACCTGCACCACCTCCAACTGCTAATTCTCTACCTATTACTCCAAATCAAGACCAATCTTCTACTGGGAAACAAGAATATTCAACTAAAGGCACTTCTGAAAATTTGTGGATTTATATACTTATCATCATTGCATTTGTGGCTGCATTGGTCATTATTGCTGTGGCTATATTTTGTTTGTGGAGAGCACGAGCAGCCAAAGCAATTAGCCCCTGGAAAACAGGAATAAGCGGACAGTTGCAAAAGGCATTTGTAACGGGGGTTCCTAAGCTGAATCGACCAGAGCTGGAGACAGCCTGTGAGGATTTCAGCAATATTGTTGATAACTTTGATGATTACACCATATACAAAGGAACACTGTCCAGTGGAGTTGAGATCGCAGTTGTTTCTACTATTGTCACTTCTTCTAAAGAATGGTCAAAGAATGCAGAGATGCTCTACAGGAGAAGGATCAGTACATTGTCTCGTGTGAACCATAAGAACTTCATCAATCTTATTGGCTTTTGTGAGGAAGAACAACCATTCACAAGGATGATGGTTTTTGAGTATGCTCCTAATGGTACCTTGTTTGAGCATCTCCACGTTAAGGAAAATGAACATCTTGATTGGACCGCAAGGACGAGGATTATTATGGGAATTGCTTATTGTTTGCAGTACATGCACCATGATCTAAATCCACCAGTATTGCCTTGCAACCTTACTTCATCTTCCATTTTTTTAACAGATGATTTTGCTGCTAAGATGGTATTAATCAGTTTTGACAAACCATTGATAGAAGATGAGTCAACTGAAGGAAAAGGGGCTAGTCGTTCTCAGGTGCCACCGAATGCAGATCCTGAAACAAATGTTTATAATTTTGGAATGGTGTTGCTTGAAATAATTTCTGGGAAACTCCCTTACTCTGAAGAACAAGGTCATCTAACCGAATTGGTTGCTGAGCACATCAAAAACAACAGAAGCATCAATTGCATGATTGATCCCATTCTGCAATCATACGAAAAGGATGAACTTGATGTCATTTGTGTAGTAATACATGATTGCATTCAAGCTGATCCAAGGTTGAGACCTACAATGAGGGATATAGTTTTTAAATTGAGAGGAGTAATCAATATATCACCAGAACAAGCAGTTCCAAGGCTTTCCCCTCTTTGGTGGGCCGAACTAGAAATACTGTCCCTTGAGACCAATTAG 2037 0.3927 MGVRWNQFGLWFKIYISLISLWEFQVCWSLNNEGLALLEFQGRITFDPYGALMNWNPNDGSPCKWLGVHCIDSKVQILDLNSLSLEGTLSPELRKLSHLKSLVLCKNNFSGPIPKELGGLAKLELLDLRDNKFTGSIPGEISSLSELKHLLLCGNKIEVNVCQGVEKPKVPSKWLFVDKCTSPITSAFGGLNRKFGNGLKLDKPIDFCQVNFYHNQHDFHEPGIAQTMPNLVNSARRKLLEQSSNLAAAPVSVSRTKPIVSLPTSFSSGAFPAVSNAKQQNLSPAPPPTANSLPITPNQDQSSTGKQEYSTKGTSENLWIYILIIIAFVAALVIIAVAIFCLWRARAAKAISPWKTGISGQLQKAFVTGVPKLNRPELETACEDFSNIVDNFDDYTIYKGTLSSGVEIAVVSTIVTSSKEWSKNAEMLYRRRISTLSRVNHKNFINLIGFCEEEQPFTRMMVFEYAPNGTLFEHLHVKENEHLDWTARTRIIMGIAYCLQYMHHDLNPPVLPCNLTSSSIFLTDDFAAKMVLISFDKPLIEDESTEGKGASRSQVPPNADPETNVYNFGMVLLEIISGKLPYSEEQGHLTELVAEHIKNNRSINCMIDPILQSYEKDELDVICVVIHDCIQADPRLRPTMRDIVFKLRGVINISPEQAVPRLSPLWWAELEILSLETN 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0654 678 MobiDBLite consensus disorder prediction 277 310 - -
Lele35g0654 678 FunFam Leucine-rich repeat receptor-like kinase 34 139 - -
Lele35g0654 678 Gene3D Transferase(Phosphotransferase) domain 1 466 659 - -
Lele35g0654 678 PANTHER PROTEIN MALE DISCOVERER 2 20 675 - -
Lele35g0654 678 MobiDBLite consensus disorder prediction 294 310 - -
Lele35g0654 678 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lele35g0654 678 Gene3D Ribonuclease Inhibitor 29 192 IPR032675 -
Lele35g0654 678 Pfam Protein tyrosine and serine/threonine kinase 397 647 IPR001245 GO:0004672|GO:0006468
Lele35g0654 678 SUPERFAMILY Protein kinase-like (PK-like) 396 646 IPR011009 -
Lele35g0654 678 SUPERFAMILY L domain-like 29 160 - -
Lele35g0654 678 ProSiteProfiles Protein kinase domain profile. 348 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0654 678 FunFam Inactive receptor-like serine/threonine-protein kinase 357 465 - -
Lele35g0654 678 Pfam Leucine rich repeat 97 157 IPR001611 GO:0005515
Lele35g0654 678 Gene3D Phosphorylase Kinase; domain 1 360 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0654 Lele-ChrLele35 4546187 4551103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0654 72 660 Receptor kinase-like Gene Family AT5G65700 25.542 1.63e-43 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lele35g0654 PK_Tyr_Ser-Thr 4e-16 CL0016