Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0641 ATGTTACATCATCCTCTTTGTGCCTCTGCTTCATTGATTCCCTCCCATTTCCTTAACCATGTGATTCTTTTGAGAAAAGATTCTGGCGACAGACTTGTTAATGTTCTGATCATGACAAGGGCTGTGCGCAGTAGGATACTCAAGGATGCGAATGGTGATATTAGTGATCATCTACGCAACCACATTCATTTAACAAATTGCATTCACTTGAAGAACCATATGCACAAGAACAGCCCCATTCTTGCAGATAGGTCGCTTATGAGGGACCTAGTTGTGTTGCAGAGGTCACGCTCTCTGAGAGATCCTTCGGCAAGTCCTCCTTCATGGCATTCTCCTTCTATAATTGAGGTTCTTTCCAAGAGGGTTGACAATGATGCTGTGGTTCAGGAGGGAAGAAGGTCTGTAGGAATTGAACGCCGGAAAGAGGGAAGGCGATTGTCTGGAGCCTCACCACCTGTGGTTAGTTTAGGTCCATCAAAAGTTGCTCCAGGTGAGGAGAGGGAGAGCCGGGGTAATGATGGAGGGTCGGCCAGCAGAGACCGAAGTAGCAGGAGTGGAATTGGAGATGGGAGGAAAGTTGGAAGAGAAGAGTCTGGTCGGAAGAGTGACAGGCCTGATTATATGGGTCTCAGTGAAGAGCAACTTTACAGTCATCTTGGCAAAGATTTGGCTGAAGAGGTTGTTTCAAGGCATTCTGAATCTAAAGAGAGAAAGAGCAAACAAAGGGGGAAGCATGTGCAAGATGTTCATGTTAAGACCCTTTCTGAGCAGCTGAAAGATGTTCCACTGGATAGTGATGATTTGGCATCTTCAAACAATAATTTTCACAGAGGGTTCCCTAGGCAGCAGAAAATTTTTGAGGCGCCAGAAGCCAGCACACGTGGTCATGGAAATGGAGTGAATAGGGGAAAAAGGCGTAAATTTCGAAGTACAAGAAGAGCTCGGACTTCTGTGGCATCTAAAGATGCTGGAGCTGAGCATGAACTGTCTGTTGCTTCTAATTCATTTGCTCATGGTTCAGCCCACCATAACTATCACTTGGAAGAGGAAAATGAGTATGCAGAAGAAAATGTCACCAGGGCACCCAAAAATGGATGTGGCATTCCTTGGAATTGGTCTAGAATTCATCATAGAGGCAAAACATTCCTTGATATGGCTGGGCGAAGTTTATCTTGTGGTTTATCAGACTCGAGGTTGAGGAAAGGCGCATTGGATGCCAATGGAAGACATATTTCTGACATGCCTGTAGCATCTGATCAATCAAGCTCATTTACGAGGTCTGAAGGAGAGGCACTGCCACTACTAGTTGAGGCATCTGGATCTCAGGGAAGTACTGAGAATGCTTGTTGGGGGCATGACTATTCTGGGGAGCTTGGTATTTTTGCTGATAATTTATTGAAGCGTGACATTGATTCTGACCTCGCTTCTGAAGCTAGATTTGGGGAACAGCATAAGATGAGAGGGAATCGTCGTGGCAGGCATCAAAGCTTAACACAAAAATATATGCCACGAACCTTCAGAGATTTAGTTGGGCAGAATTTGGTGGCACAAGCTCTATCAAATGCAGTCATGAGAAGAAAAGTTGGATTTCTGTACGTGTTTTATGGACCCCATGGCACTGGAAAAACTTCCTGTGCCCGGATATTCGCTAGAGCTTTAAATTGTCATTCTTCCGAACACCCAAAACCATGTGGCTTTTGCAATTCTTGTGTAGCACATGATATGGGCAAGAGCAGAAGTATAAGGGAAGTTGGTCCAGTCAGTAATTTTGACTTTGAGAGCATCATGGATCTTCTTGACAACATGATTGTTTCCCAGCTTGCCTCACAATACAGAGTGTTTATTTTTGATGACTGTGATACTCTGTCAGCTGAATGCTGGAGTGCCATATCGAAGGTCATTGATCGAGCTCCTAGACGTGTGGTTTTTATACTTGTTAGTTCGTCTCTTGATGGATTGCCTCACATAATCATATCCAGGTGTCAGAAATTTTTCTTCCCAAAGCTGAAAGATTCAGATATTATGCATACATTACAGAGGATTGCAACCAGAGAGGGTCTTGAAATTGATAGGGAAGCTTTGAAACTTATTGTATCAAGATCAGATGGATCATTGAGAGATGCTGAGATGACCCTTGAACAACTTAGTTTGCTTGGGCAAAGAATATCAGTTCCTCTTGTACAGGAATTAGTTGGGCTTATCTCTGATGAAAAATTGGTTGATCTGCTTGATTTGGCACTGTCCGCAGACACAGTTAACACTGTGAAGAATTTGAGAGTGATAATGGAAACTGGTGTTGAGCCGTTAGCCTTAATGTCGCAGCTTGCTACTGTAATTACTGACATACTTGCTGGGACCTATGATTTCACAAGAGAAAGGAGGAGAAGGAAGTTTTTCCGGAGACATCCATTATTGAAAGAAGATATGGAAAAGCTACGCCAAGCTTTGAAAACTTTATCCGAGGCTGAGAAGCAGTTGAGGATGTCCAATGACAAACTAACCTGGCTGACGGCTGCATTGCTTCAACTTGCTCCTGACCAGCAATATATGTTGCCTACATCATCTGATAATAGTTTCAACCAGAGTCCCTTACCCCTAAATAATGCAGATGGGAGAGAAGCAGCCCGAAGAACAAGTACTAGTGTTGAAATTCCTCTCAAAGAGAGGCGTTTATCAATGGACTCTAGAACAGAGAATATCCATGCTGGTAGTTCTGCTGACGGTATGGCAAAGGCTCTTAATTCAGATAATAAAAGACTCGCTGTGGCTGGTTTTGTGCCTCAGCAGATGTCTTCACATGTTACCGATATGATTAGAATGAATGACAGACAGAATCTGGGTAAAAACCGGAAAGGAATTGAAGAGATATGGTTAGAGGTGCTTGACAGAATTGAGGTTAATGGTCTAAAGGAGTTTTTATATAGAGAAGGGAAGCTGGTCTCTGTTAGTTTTGGTGCAGCTCCAACTGTGCAGTTAATGACTAGTTCCCAACAGACCAAATCTGCTACTGAGAAGTTCAGGGGGCAGATTTTACAGGCATTTGAATCTGTCCTTGGATCTTCTGTAACGTTAGAAATTAGATGTGAATCAAACAGAGATGCAGGATCAGGGTCTCAGCTTCCTCTTATACTGCCTTCCACTAAAGATGGTTCTGTAGAAAAGAAAATGAGTGAAATTGTAGAAGAAGCAGCAGCTTCTCCGAAGGACCATAAGAATAACGAGCAGCATGCTGATGTTAACAGAAAGCCAATTGTGACTTCACGCTTAGAAAGAAGGAGGCCTAGGGAACAAGGTCAAAGCCGAAGCATCGTGAAAAGTAAGGTATCTCTTGCTCATGTAATCCAGCAGGCAGAAGGACATACACAGCGTAGCGGGTGGTCAAAACGCAAAGCGGTTTCCATTGCTGAAAAGCTCGAACAAGAGAATCTGAGACTGGAGCCAAGATCAAGGAGCTTGCTATGCTGGAAAGCATCACGAGTAACCCGGCGGAAGCTTTCGCGGTTGAAAGTAAGAACCAGAAAACCTCTTGCGTTGCTGAATCTGGTCTCATGTGGAAAATGTCTCAGTTCTAAATCTCCAAGGTCAAGCCTCTTTCTTTATTTATTTAGTCTAATAAAGGAGTTCGAGATTGTATATCCGACTAAGAAAATGTAG 3654 0.434 MLHHPLCASASLIPSHFLNHVILLRKDSGDRLVNVLIMTRAVRSRILKDANGDISDHLRNHIHLTNCIHLKNHMHKNSPILADRSLMRDLVVLQRSRSLRDPSASPPSWHSPSIIEVLSKRVDNDAVVQEGRRSVGIERRKEGRRLSGASPPVVSLGPSKVAPGEERESRGNDGGSASRDRSSRSGIGDGRKVGREESGRKSDRPDYMGLSEEQLYSHLGKDLAEEVVSRHSESKERKSKQRGKHVQDVHVKTLSEQLKDVPLDSDDLASSNNNFHRGFPRQQKIFEAPEASTRGHGNGVNRGKRRKFRSTRRARTSVASKDAGAEHELSVASNSFAHGSAHHNYHLEEENEYAEENVTRAPKNGCGIPWNWSRIHHRGKTFLDMAGRSLSCGLSDSRLRKGALDANGRHISDMPVASDQSSSFTRSEGEALPLLVEASGSQGSTENACWGHDYSGELGIFADNLLKRDIDSDLASEARFGEQHKMRGNRRGRHQSLTQKYMPRTFRDLVGQNLVAQALSNAVMRRKVGFLYVFYGPHGTGKTSCARIFARALNCHSSEHPKPCGFCNSCVAHDMGKSRSIREVGPVSNFDFESIMDLLDNMIVSQLASQYRVFIFDDCDTLSAECWSAISKVIDRAPRRVVFILVSSSLDGLPHIIISRCQKFFFPKLKDSDIMHTLQRIATREGLEIDREALKLIVSRSDGSLRDAEMTLEQLSLLGQRISVPLVQELVGLISDEKLVDLLDLALSADTVNTVKNLRVIMETGVEPLALMSQLATVITDILAGTYDFTRERRRRKFFRRHPLLKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYMLPTSSDNSFNQSPLPLNNADGREAARRTSTSVEIPLKERRLSMDSRTENIHAGSSADGMAKALNSDNKRLAVAGFVPQQMSSHVTDMIRMNDRQNLGKNRKGIEEIWLEVLDRIEVNGLKEFLYREGKLVSVSFGAAPTVQLMTSSQQTKSATEKFRGQILQAFESVLGSSVTLEIRCESNRDAGSGSQLPLILPSTKDGSVEKKMSEIVEEAAASPKDHKNNEQHADVNRKPIVTSRLERRRPREQGQSRSIVKSKVSLAHVIQQAEGHTQRSGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKASRVTRRKLSRLKVRTRKPLALLNLVSCGKCLSSKSPRSSLFLYLFSLIKEFEIVYPTKKM 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0641 1217 FunFam DNA polymerase III subunit gamma/tau 490 668 - -
Lele35g0641 1217 Pfam DNA polymerase III, delta subunit 512 669 - -
Lele35g0641 1217 SMART AAA_5 528 669 IPR003593 -
Lele35g0641 1217 Coils Coil 802 832 - -
Lele35g0641 1217 MobiDBLite consensus disorder prediction 1063 1102 - -
Lele35g0641 1217 SUPERFAMILY post-AAA+ oligomerization domain-like 740 843 IPR008921 GO:0003677|GO:0006260
Lele35g0641 1217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 531 716 IPR027417 -
Lele35g0641 1217 MobiDBLite consensus disorder prediction 184 208 - -
Lele35g0641 1217 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 498 905 - -
Lele35g0641 1217 MobiDBLite consensus disorder prediction 224 248 - -
Lele35g0641 1217 FunFam DNA polymerase III subunit gamma/tau 670 732 - -
Lele35g0641 1217 CDD HLD_clamp_pol_III_gamma_tau 669 732 IPR045085 -
Lele35g0641 1217 Gene3D - 487 666 IPR027417 -
Lele35g0641 1217 MobiDBLite consensus disorder prediction 163 177 - -
Lele35g0641 1217 Pfam DNA polymerase III subunits gamma and tau domain III 725 784 IPR022754 GO:0003887
Lele35g0641 1217 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 495 843 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Lele35g0641 1217 Gene3D - 670 732 - -
Lele35g0641 1217 MobiDBLite consensus disorder prediction 288 326 - -
Lele35g0641 1217 MobiDBLite consensus disorder prediction 299 314 - -
Lele35g0641 1217 MobiDBLite consensus disorder prediction 1063 1100 - -
Lele35g0641 1217 CDD AAA 510 669 - -
Lele35g0641 1217 MobiDBLite consensus disorder prediction 133 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0641 Lele-ChrLele35 4373492 4379620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0641 495 781 Core DNA Replication Machinery Family AT1G21690 22.917 4.89e-13 70.1