Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0628 ATGGCTTCGTCTTCTTCAACTAATGCAACCCGTGAGGTTGTTAATCTGAACCTCAATGGCAAATCCAATTATAAGGATTCCTGCATCCCCGACGTCATCGTCCCTTTCTTGCAGAAGGTTCCTCCTCCTCCTCTTTCTCTTTCTAAAGTGTCGAGCCTTTTATGTCGACGAAGTGTTAATCCATCTGAGGTTGTCGGATTTTTTTATTATTTACAGTTGGTGGCGGAATTTGTGGGGACATTTTTTCTGATGTTTGCAGGGCAAGCATCAGAGGTTGTGAACGAGGGCTACGACAACCAACTAGCACTTCCTGGGATTGCCGTAGTTTGGGGTCTTGCCGTTTTGATTCTCGTCTACGCCGTCAGTCACATCTCCGGCGCCCATTTCAATCCCGCCGTCACTCTCGCTTTTGCTTCTATCGGACGTTTCCCCCTCATACAGGTGCCAGCTTATATATCAGTGCAGGTTATGGCATCGATACTTGCGAGTGGGACTCTGAGGCTTATATTCACAGGAAGGCATGACCACTTCGCAGGAACACTATTATCTGGGACTCATCTTCAAGGTTTTGTGGTTGAGTTCATCATCACCTTCTACATCATGCTTGTTAAGTATTCTACCAGTGGTCTCGCCACTGATAACAAGGCTATTACTCAGGTGGCAGGTCTGGCAGTAGGGTGTACCATGTTGCTGAATGTGATGTTTGCCGGGTGA 714 0.472 MASSSSTNATREVVNLNLNGKSNYKDSCIPDVIVPFLQKVPPPPLSLSKVSSLLCRRSVNPSEVVGFFYYLQLVAEFVGTFFLMFAGQASEVVNEGYDNQLALPGIAVVWGLAVLILVYAVSHISGAHFNPAVTLAFASIGRFPLIQVPAYISVQVMASILASGTLRLIFTGRHDHFAGTLLSGTHLQGFVVEFIITFYIMLVKYSTSGLATDNKAITQVAGLAVGCTMLLNVMFAG 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0628 237 ProSitePatterns MIP family signature. 128 136 IPR022357 -
Lele35g0628 237 PANTHER AQUAPORIN NIP2-1 49 237 IPR034294 -
Lele35g0628 237 PRINTS Major intrinsic protein family signature 222 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele35g0628 237 PRINTS Major intrinsic protein family signature 71 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele35g0628 237 PRINTS Major intrinsic protein family signature 110 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele35g0628 237 PRINTS Major intrinsic protein family signature 147 166 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele35g0628 237 PRINTS Major intrinsic protein family signature 192 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele35g0628 237 SUPERFAMILY Aquaporin-like 67 237 IPR023271 -
Lele35g0628 237 Gene3D Glycerol uptake facilitator protein. 62 237 IPR023271 -
Lele35g0628 237 Pfam Major intrinsic protein 71 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0628 Lele-ChrLele35 4275946 4278169 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0628 69 237 Major Intrinsic Protein MIP AT4G18910 60.227 2.08e-68 208