Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0627 ATGAACCCGGCAAGAAGCTTAGGTCCAGCGATTGTGTGGCACAAGTACACTGGATTATGGGTGTACATGACAGCGCCTGTGGCAGGAGCAGTGGCGGGGGCATGGGTGTATAACATCATGATTTATACAAAAAAGCCGATAAAAGATATCACAAAGACTGCTTCTTTCAACAAAGTTGCTTCTTTCCACAAAGTTGCTTCCTTGAGAGATATCACAAAGACTGCTTCTTTCAACCAAGTTTCAAGCGTTTGTGATGATTCAATCATTTCTGAATCCTCCCAGGCAAAATTAATTCGCTAG 300 0.43 MNPARSLGPAIVWHKYTGLWVYMTAPVAGAVAGAWVYNIMIYTKKPIKDITKTASFNKVASFHKVASLRDITKTASFNQVSSVCDDSIISESSQAKLIR 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0627 99 PANTHER AQUAPORIN NIP2-1 1 56 IPR034294 -
Lele35g0627 99 SUPERFAMILY Aquaporin-like 1 47 IPR023271 -
Lele35g0627 99 Pfam Major intrinsic protein 1 37 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele35g0627 99 Gene3D Glycerol uptake facilitator protein. 1 55 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0627 Lele-ChrLele35 4274293 4274592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0627 1 56 Major Intrinsic Protein MIP AT5G37820 58.929 2.24e-20 81.3