Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0625 ATGGCAGAGGCGTCTGCAGCGAACGGAACCCACGAGTTGGGGGCAGAATTGGCGGGTACATACTTTCTGATATTTGCCGGCGAAGCGGCGGTGATGGTGGACAAGGGGTACGACAACCAAGTAACACATCCTGGGATTTCCATAGTTTGGGGTCTTGTGGTTATGGTTCTTGCGTATTCCCTTGGTCACATCTCTGGCGCTCATTTCAATCCTTCTGTCACCATCGCTTTCGCTTCTACCAAACGTTTTCCCCTCAAACAGGTACCAGCTTATGTATTAGTTCAGGTTCTGGGATCGACGCTTGCGAGTGGGACTCTGAGACTTATATTTGAAGGAAGCAGAGACCAGTTCGCAGGAACGTTAGTTTCTGGGACGAATCTTCAAGGTTTTGTGGTCGAGTTCATCATCACCTTCTTCCTCATGTTCGTCATTTCTGGTGTCGCCACCGATAACAGAGCGATCGGTGATCTGGCAGGTCTTGCGATAGGGGCTACGGTGTTGCTTAATGTCATGTTTGCTGGGTATTACTATAATCTTCTCATATCCTCATAA 552 0.4873 MAEASAANGTHELGAELAGTYFLIFAGEAAVMVDKGYDNQVTHPGISIVWGLVVMVLAYSLGHISGAHFNPSVTIAFASTKRFPLKQVPAYVLVQVLGSTLASGTLRLIFEGSRDQFAGTLVSGTNLQGFVVEFIITFFLMFVISGVATDNRAIGDLAGLAIGATVLLNVMFAGYYYNLLISS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0625 183 Pfam Major intrinsic protein 10 176 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele35g0625 183 Gene3D Glycerol uptake facilitator protein. 1 181 IPR023271 -
Lele35g0625 183 PRINTS Major intrinsic protein family signature 132 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele35g0625 183 PRINTS Major intrinsic protein family signature 50 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele35g0625 183 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele35g0625 183 PRINTS Major intrinsic protein family signature 11 30 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele35g0625 183 ProSitePatterns MIP family signature. 68 76 IPR022357 -
Lele35g0625 183 SUPERFAMILY Aquaporin-like 11 178 IPR023271 -
Lele35g0625 183 PANTHER AQUAPORIN NIP2-1 10 174 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0625 Lele-ChrLele35 4260139 4261092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0625 11 174 Major Intrinsic Protein MIP AT4G18910 71.930 9.25e-82 240